Ref: Golebiewski,M. et al. unpublished

REBASE ref # 7954

Sequence length:GenBank #:
chromosome 1: 5,172,644 bp LS992175
chromosome 1: 5,009,078 bp LS992183
chromosome main: 5,085,387 bp OW969904
plasmid 1: 40,186 bp LT992437
plasmid 2: 159,493 bp LS992176
plasmid 2: 185,156 bp LS992184
plasmid 3: 71,403 bp LS992177
plasmid P1: 191,011 bp OW969905
plasmid P2: 43,157 bp OW969906

REBASE acronym: CfrSC21

Org_num: 28410

 

All begin AI3057V1_, AI3057V1_REPA, CF12SC21KPC_, CFE2614_, CFU2785_

Type I
ORF Gene Most similar Specificity Name
 
chromosome 1
 
757 Uncharacterised protein
758 M M.Sen80013ORF6310P (100% identity) M.Cfr2785ORF758P
759 Uncharacterised protein
760 S S.Sen80013ORF6310P (100% identity) S.Cfr2785ORF758P
761 Uncharacterised protein
762 R Sen80013ORF6310P (100% identity) Cfr2785ORF758P
763 Uncharacterised protein
 
4238 Uncharacterised protein
4239 R EhoG17ORF4570P (98% identity) Cfr2785ORF4240P
4240 M M.CfrZS47ORF21595P (100% identity) M.Cfr2785ORF4240P
4241 S S.CfrZS47ORF21595P (100% identity) S.Cfr2785ORF4240P
4242 Thymidylate synthase 1
 
chromosome main
 
746 260 aa hypothetical protein
747 R CfrSK3ORF3795P (99% identity) Cfri0ORF748P
748 M M.CfrSK3ORF3795P (96% identity) M.Cfri0ORF748P
749 S S.Eco7607ORFGP (60% identity) S.Cfri0ORF748P
750 153 aa hypothetical protein
 
4428 621 aa hypothetical protein
4429 M M.CfrCf1ORF22365P (99% identity) M.Cfri0ORF4429P
4430 S S.EcoCT01ORF24695P (65% identity) S.Cfri0ORF4429P
4431 R Eco3C16ORF3535P (99% identity) Cfri0ORF4429P
4432 112 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
chromosome 1
 
369 cell division protein DamX
370 M M.Eco5172DamP (100% identity) GATC M.Cfi2614DamP
371 Ribulose-phosphate 3-epimerase
 
480 Uncharacterised protein
481 M M.Eco5172ORF4078P (100% identity) ATGCAT M.Cfi2614ORF481P
482 Prophage CP4-57 integrase
 
1353 Uncharacterised protein
1354 M M.CbrCB04ORF14280P (96% identity) M.Cfi2614ORF1354P
1355 Uncharacterised protein
 
2006 hydrolase
??? M M.CspSL156ORF9755P (100% identity) CCWGG M.Cfi2614ORF2007P
2008 V V.CyoL6ORF9385P (100% identity) V.Cfi2614ORF2007P
2009 inner membrane transporter YedA
 
2117 Uncharacterised protein
2118 M M.CspSL156ORF10315P (100% identity) M.Cfi2614ORF2118P
2119 Uncharacterised protein
 
4134 Uncharacterised protein
4135 M M.Cfri22ORF3933P (100% identity) M.Cfi2614ORF4135P
4136 Uncharacterised protein
 
chromosome 1
 
430 cell division protein DamX
431 M M.Eco5172DamP (100% identity) GATC M.Cfr2785DamP
432 Ribulose-phosphate 3-epimerase
 
541 Uncharacterised protein
542 M M.CfrZS47ORF2675P (100% identity) ATGCAT M.Cfr2785ORF542P
543 Hin recombinational enhancer-binding protein
 
1499 Uncharacterised protein
1500 M M.CfrZS47ORF7815P (100% identity) M.Cfr2785ORF1500P
1501 Uncharacterised protein
 
1944 hydrolase
1945 M DNA-cytosine methyltransferase CCWGG M.Cfr2785ORF1945P
1946 V V.CfrZS47ORF10210P (100% identity) V.Cfr2785ORF1945P
1947 inner membrane transporter YedA
 
2796 Uncharacterised protein
2797 M M.CfrZS47ORF14380P (100% identity) M.Cfr2785ORF2797P
2798 Uncharacterised protein
 
3249 Uncharacterised protein
3250 M M.CfrZS47ORF16765P (100% identity) M.Cfr2785ORF3250P
3251 Uncharacterised protein
 
4430 PglZ domain protein
4431 RM Cko0aORF3687BP (100% identity) Cfr2785ORF4431BP
4432 Uncharacterised protein
4433 RM Spu12093ORF4120AP (80% identity) Cfr2785ORF4431AP
4434 Uncharacterised protein
 
4531 Uncharacterised protein
4532 M M.CfrZS47ORF23465P (99% identity) M.Cfr2785ORF4532P
4533 Crossover junction endodeoxyribonuclease RusA
 
chromosome main
 
317 Cell division protein DamX
318 M M.Eco5172DamP (100% identity) GATC M.Cfri0DamP
319 Ribulose-phosphate 3-epimerase
 
419 54 aa hypothetical protein
420 M M.CspLUTT5ORF2195P (100% identity) ATGCAT M.Cfri0ORF420P
421 DNA-binding protein Fis
 
1153 115 aa hypothetical protein
1154 M M.Csp424ORF23825P (100% identity) M.Cfri0ORF1154P
1155 73 aa hypothetical protein
 
1443 53 aa hypothetical protein
1444 M M.Cfr370ORF6320P (96% identity) M.Cfri0ORF1444P
1445 192 aa hypothetical protein
 
1863 230 aa hypothetical protein
1864 M M.Cfri8ORF1925P (100% identity) CCWGG M.Cfri0ORF1864P
1865 V V.CyoL6ORF9385P (100% identity) V.Cfri0ORF1864P
1866 inner membrane transporter YedA
 
3027 188 aa hypothetical protein
3028 M M.Ero872ORF2395P (99% identity) M.Cfri0ORF3028P
3029 143 aa hypothetical protein
 
3309 70 aa hypothetical protein
3310 M M.Cfr10159ORF3351P (99% identity) M.Cfri0ORF3310P
3311 109 aa hypothetical protein
 
4247 Toxic protein SymE
4248 R CfrZS47ORF21490P (98% identity) Cfri0ORF4248P
4249 265 aa hypothetical protein
 
plasmid 1
 
47 190 aa hypothetical protein
48 R PaesC79ORF32345P (96% identity) CfrSC21ORF48P
49 82 aa hypothetical protein
 
plasmid 2
 
5161 cobalt transporter ATP-binding subunit
5162 M M.SmaBWH35ORF16650P (100% identity) CCWGG M.Cfi2614ORF5162P
5163 R SmaBWH35ORF16650P (100% identity) CCWGG Cfi2614ORF5162P
5164 Site-specific recombinase XerD
 
5169 Uncharacterised protein
5170 M M.Kpni11ayORF5166P (100% identity) M.Cfi2614ORF5170P
5171 Uncharacterised protein
 
plasmid 2
 
5175 Uncharacterised protein
5176 M DNA adenine methyltransferase YhdJ M.Cfr2785ORF5176P
5177 PRTRC system protein D
 
plasmid 3
 
5350 IS1 transposase
5351 M DNA-cytosine methyltransferase CCWGG M.Cfi2614ORF5351P
5352 R Type-2 restriction enzyme EcoRII CCWGG Cfi2614ORF5351P
5353 Integrase core domain protein
 
plasmid P1
 
4950 DNA polymerase III subunit beta
4951 M M.Sen3039ORF24445P (100% identity) GATC M.Cfri0ORF4951P
4952 76 aa hypothetical protein
 
plasmid P2
 
5141 190 aa hypothetical protein
5142 R PaesC79ORF32345P (96% identity) CTCGAG Cfri0ORF5142P
5143 82 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
chromosome main
 
634 30 aa hypothetical protein
635 R EgeA4ORF9240P (97% identity) Cfri0ORF636P
636 M M.EgeA4ORF9240P (99% identity) M.Cfri0ORF636P
637 900 aa hypothetical protein
 
66 73 aa hypothetical protein NF29_01680
4270 M M.Kmi375ORF4337P (100% identity) M.Cfri0ORF4270P
4271 R Kmi375ORF4337P (100% identity) Cfri0ORF4270P
4272 ATP-dependent DNA helicase PcrA
 
plasmid P1
 
4968 164 aa hypothetical protein
4969 R Kqu2018ORF4320P (100% identity) Cfri0ORF4969P
4970 128 aa hypothetical protein