Salmonella enterica subsp. enterica serovar Pullorum S06004 |
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Putative Salmonella enterica subsp. enterica serovar Pullorum S06004 RM systems
Ref: Li,Q. et al. unpublished
REBASE ref # 16303
Complete sequence: 4,682,599 bp
GenBank #: CP006575
REBASE acronym: Sen6004
Org_num: 10950
All begin I137_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21550 | 317 aa hypothetical protein | |||
| 21555 | R | SenST572ORF16905P (100% identity) | GGYANNNNNNTCG | Sen6004ORF21565P |
| 21560 | S | S.Ssp1806ORF19520P (100% identity) | GGYANNNNNNTCG | S.Sen6004ORF21565P |
| 21565 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen6004ORF21565P |
| ??? | 390 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8530 | multidrug transporter | |||
| 8535 | V | V.StyUK1DcmP (100% identity) | V.Sen6004DcmP | |
| 8540 | M | M.Ssp1806DcmP (100% identity) | CCWGG | M.Sen6004DcmP |
| 8545 | hydrolase | |||
| 13100 | 695 aa hypothetical protein | |||
| 13105 | M | M.EcoHEC0005ORF21170P (100% identity) | GATC | M.Sen6004ORF13105P |
| 13110 | 75 aa hypothetical protein | |||
| 16215 | Fis family transcriptional regulator | |||
| 16220 | M | M.Ssp1806ORF2265P (100% identity) | ATGCAT | M.Sen6004ORF16220P |
| 16225 | 54 aa hypothetical protein | |||
| 19575 | pseudogene | |||
| 19580 | M | M.StyTDamP (100% identity) | GATC | M.Sen6004DamP |
| 19585 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11890 | cytochrome D ubiquinol oxidase subunit I | |||
| ??? | R | Ssp1806ORF16970P (99% identity) | CAGAG | Sen6004ORF11905P |
| ??? | M | M.SenCY16ORF16870P (100% identity) | CAGAG | M.Sen6004ORF11905P |
| 11910 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21565 | DNA methyltransferase | |||
| 22340 | 388 aa hypothetical protein | |||
| ??? | R | SenSG9MrrP (100% identity) | Sen6004Mrr2P | |
| 22340 | R | Ssp1806MrrP (100% identity) | Sen6004MrrP | |
| ??? | 390 aa hypothetical protein | |||
| 21570 | 44 aa hypothetical protein | |||