Salmonella bongori N268-08 |
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Putative Salmonella bongori N268-08 RM systems
Ref: Marti,R. et al. unpublished
REBASE ref # 16399
| Sequence length: | GenBank #: | |
| Chromosome: | 4,683,551 bp | CP006608 |
| plasmid RM1: | 89,986 bp | CP006609 |
REBASE acronym: Sbo268
Org_num: 10952
All begin A464_, A464_plas
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4489 | HrgA protein | |||
| 4490 | M | M.SboCATOORFFP (95% identity) | CAGNNNNNNTCAG | M.Sbo268ORF4490P |
| 4491 | S | S.SboCATOORFFP (100% identity) | CAGNNNNNNTCAG | S.Sbo268ORF4490P |
| 4492 | R | SboCATOORFFP (99% identity) | CAGNNNNNNTCAG | Sbo268ORF4490P |
| 4493 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 475 | 65 aa hypothetical protein | |||
| 476 | M | M.SboCATOORFEP (100% identity) | M.Sbo268ORF476P | |
| 477 | phage lysozyme lysis protein | |||
| 1372 | 101 aa hypothetical protein | |||
| 1373 | M | M.Sen11065ORF15840P (95% identity) | M.Sbo268ORF1373P | |
| 1374 | 79 aa hypothetical protein | |||
| 2139 | Permease of the drug/metabolite transporter | |||
| 2140 | V | V.Sen0440DcmP (100% identity) | V.Sbo268DcmP | |
| 2141 | M | M.SboCATODcmP (100% identity) | CCWGG | M.Sbo268DcmP |
| 2142 | metal-dependent phospho hydrolase | |||
| 2743 | Orf83 | |||
| 2744 | M | M.KmiBD50ORF3800P (99% identity) | GATC | M.Sbo268ORF2744P |
| 2745 | Phage replication protein | |||
| 3278 | Phage replication protein | |||
| ??? | M | M.SenST203ORF4380P (94% identity) | GATC | M.Sbo268ORF3279P |
| 3280 | 76 aa hypothetical protein | |||
| 3465 | DNA-binding protein Fis | |||
| 3466 | M | M.Sen0440ORFCP (100% identity) | ATGCAT | M.Sbo268II |
| 3467 | periplasmic protein | |||
| 3560 | Ribulose-phosphate 3-epimerase | |||
| 3561 | M | M.SboSe40DamP (100% identity) | GATC | M.Sbo268DamP |
| 3562 | DamX an inner membrane protein involved inbile | |||
| 4487 | Glycogen synthesis protein glgS | |||
| 4488 | R | Sbo158ORFCP (84% identity) | Sbo268ORF4488P | |
| 4489 | HrgA protein | |||
| plasmid RM1 | ||||
| 76 | cytoplasmic protein | |||
| 77 | M | M.SboCATOORFDP (100% identity) | M.Sbo268ORF77P | |
| 78 | cytoplasmic protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4489 | HrgA protein | |||
| 4490 | M | M.SboCATOORFAP (100% identity) | CAGAG | M.Sbo268I |
| 4491 | 437 aa hypothetical protein | |||
| 4492 | R | SboCATOORFAP (99% identity) | CAGAG | Sbo268IP |
| 4493 | metal-dependent hydrolase | |||