Salmonella enterica subsp. enterica Serovar Cubana CFSAN002050 |
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Putative Salmonella enterica subsp. enterica Serovar Cubana CFSAN002050 RM systems
Ref: Timme,R.E. et al. unpublished
REBASE ref # 18681
| Sequence length: | GenBank #: | |
| Chromosome: | 4,977,480 bp | CP006055 |
| plasmid unnamed: | 166,668 bp | CP006056 |
| plasmid unnamed: | 122,863 bp | CP006057 |
REBASE acronym: Sen2050
Org_num: 10834
All begin CFSAN002050_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4925 | 112 aa hypothetical protein | |||
| 4930 | R | Sen42234ORF21565P (100% identity) | GGANNNNNNATTA | Sen2050IIIP |
| 4935 | S | S.Sen42234ORF21565P (100% identity) | GGANNNNNNATTA | S.Sen2050III |
| 4940 | M | M.Sen42234ORF21565P (100% identity) | GGANNNNNNATTA | M.Sen2050III |
| 4945 | 621 aa hypothetical protein | |||
| 5870 | nuclease | |||
| 5875 | R | Sen76814ORF1304P (100% identity) | RAACNNNNNTGA | Sen2050IVP |
| 5880 | S | S.Sen76814ORF1304P (100% identity) | RAACNNNNNTGA | S.Sen2050IV |
| 5885 | M | M.Sen76814ORF1304P (100% identity) | RAACNNNNNTGA | M.Sen2050IV |
| 5890 | 88 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5850 | integrase | |||
| 5855 | R | Sen71944ORF13430P (100% identity) | GAAC | Sen2050ORF5855P |
| 5860 | 334 aa hypothetical protein | |||
| 16760 | multidrug transporter | |||
| 16765 | V | V.StyUK1DcmP (100% identity) | V.Sen2050DcmP | |
| 16770 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen2050DcmP |
| 16775 | hydrolase | |||
| 16975 | tryptophan synthase subunit alpha | |||
| 16980 | M | M.SenUA34ORF807P (100% identity) | M.Sen2050ORF16980P | |
| 16985 | 852 aa hypothetical protein | |||
| 23895 | Fis family transcriptional regulator | |||
| 23900 | M | methyltransferase | ATGCAT | M.Sen2050II |
| 23905 | 54 aa hypothetical protein | |||
| 24375 | ribulose-phosphate 3-epimerase | |||
| 24380 | M | DNA adenine methylase | GATC | M.Sen2050DamP |
| 24385 | cell division protein DamX | |||
| plasmid unnamed | ||||
| 230 | 153 aa hypothetical protein | |||
| 235 | M | M.Ssp15303ORFEP (99% identity) | GATC | M.Sen2050ORF235P |
| 240 | DNA-binding protein | |||
| 475 | 202 aa hypothetical protein | |||
| 480 | M | M.Ssp15303ORFDP (100% identity) | M.Sen2050ORF480P | |
| 485 | Insertion element iso-IS1N protein insA | |||
| plasmid unnamed | ||||
| 915 | nuclease | |||
| 920 | M | M.Ssp15303DcmP (100% identity) | CCWGG | M.Sen2050Dcm2P |
| 925 | 55 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8370 | sugar transporter | |||
| 8375 | M | M.Sen76814ORF1631P (100% identity) | CAGAG | M.Sen2050I |
| 8380 | R | Sen76814ORF1631P (100% identity) | CAGAG | Sen2050IP |
| 8385 | cytochrome D ubiquinol oxidase subunit I | |||