Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921 RM systems
Ref: Timme,R.E. et al. unpublished
REBASE ref # 16887
| Sequence length: | GenBank #: | |
| Chromosome: | 4,859,931 bp | CP006048 |
| plasmid unnamed: | 221,009 bp | CP006050 |
REBASE acronym: SenTF
Org_num: 10831
All begin CFSAN001921_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17790 | restriction endonuclease | |||
| 17795 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenTFIIP |
| 17800 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenTFII |
| 17805 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenTFII |
| 17810 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 50 | 54 aa hypothetical protein | |||
| 55 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenTFIII |
| 60 | Fis family transcriptional regulator | |||
| 6880 | 174 aa hypothetical protein | |||
| 6885 | 297 aa hypothetical protein | |||
| 6880 | 174 aa hypothetical protein | |||
| 6885 | M | M.StyUK1V (100% identity) | GATC | M.SenTFORF6885P |
| 6890 | crossover junction endodeoxyribonuclease | |||
| 7105 | hydrolase | |||
| 7110 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenTFDcmP |
| 7115 | V | V.StyUK1DcmP (100% identity) | V.SenTFDcmP | |
| 7120 | multidrug transporter | |||
| 23020 | cell division protein DamX | |||
| 23025 | M | M.StyTDamP (100% identity) | GATC | M.SenTFDamP |
| 23030 | ribulose-phosphate 3-epimerase | |||
| plasmid unnamed | ||||
| 23880 | 120 aa hypothetical protein | |||
| 23885 | M | M.Vch11614ORFCP (100% identity) | M.SenTFORF23885P | |
| 23890 | 145 aa hypothetical protein | |||
| 24360 | 100 aa hypothetical protein | |||
| 24805 | M | M.SenS070ORF23790P (100% identity) | CCNGG | M.SenTFORF24805P |
| 24365 | 143 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3515 | 291 aa hypothetical protein | |||
| 3520 | M | M.SenXSKORFDP (100% identity) | M.SenTFORF3520P | |
| 3525 | R | SenXSKORFDP (100% identity) | SenTFORF3520P | |
| 3530 | transposase | |||
| 15245 | cytochrome D ubiquinol oxidase subunit I | |||
| 15250 | R | StyUK1IP (99% identity) | CAGAG | SenTFIP |
| 15255 | M | M.StyUK1I (100% identity) | CAGAG | M.SenTFI |
| 15260 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17785 | membrane protein | |||
| 17790 | R | StyUK1MrrP (100% identity) | SenTFMrrP | |
| 17795 | 1169 aa hypothetical protein | |||