Alteromonas macleodii 'Ionian Sea UM7' |
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Putative Alteromonas macleodii 'Ionian Sea UM7' RM systems
Ref: Lopez-Perez,M. et al. Genome Biol Evol 5 (6), 1220-1232 (2013)
REBASE ref # 16173
Complete sequence: 4,628,378 bp
GenBank #: CP004853
REBASE acronym: AmaUM7
Org_num: 10814
All begin I635_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4395 | 199 aa hypothetical protein | |||
| 4400 | M | M1.AmeUM8ORF4360P (100% identity) | M1.AmaUM7ORF4400P | |
| 4405 | M | M2.AmeUM8ORF4360P (100% identity) | M2.AmaUM7ORF4400P | |
| 4410 | S | S.AmaDE1ORF4430P (100% identity) | S.AmaUM7ORF4400P | |
| 4415 | R | AmeUM8ORF4360P (100% identity) | AmaUM7ORF4400P | |
| 4420 | 166 aa hypothetical protein | |||
| 5800 | 322 aa hypothetical protein | |||
| 5805 | M | M.AspG162ORFAP (100% identity) | M.AmaUM7ORF5805P | |
| 5810 | S | S.AspRW2A1ORF8925P (100% identity) | S.AmaUM7ORF5805P | |
| 5815 | 366 aa hypothetical protein | |||
| 5820 | R | AspG162ORFAP (100% identity) | AmaUM7ORF5805P | |
| 5825 | ATP-binding region, ATPase-like protein | |||
| 20160 | 263 aa hypothetical protein | |||
| ??? | M | M.AspG152ORFAP (100% identity) | M.AmaUM7ORF20165P | |
| 20170 | R | AspG152ORFAP (100% identity) | AmaUM7ORF20165P | |
| 20175 | VrlI like protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 550 | 615 aa hypothetical protein | |||
| 555 | M | M.AspG109ORFAP (100% identity) | M.AmaUM7ORF555P | |
| 560 | type III restriction protein res subunit | |||
| 2285 | 66 aa hypothetical protein | |||
| 2290 | M | M.AspG91ORFAP (100% identity) | GATC | M.AmaUM7DamP |
| 2295 | DamX-like protein | |||
| 8690 | 94 aa hypothetical protein | |||
| 8695 | M | phage DNA methyltransferase | GATC | M.AmaUM7ORF8695P |
| 8700 | 243 aa hypothetical protein | |||
| 8695 | phage DNA methyltransferase | |||
| 8700 | M | M.AmeUM8ORF8615P (100% identity) | TACGTA | M.AmaUM7ORF8700P |
| 8705 | phage-like protein | |||
| 12390 | 70 aa hypothetical protein | |||
| 12395 | M | DNA-cytosine methyltransferase | M.AmaUM7ORF12395P | |
| 12400 | transposase IS66 | |||
| 16010 | 512 aa hypothetical protein | |||
| 16015 | M | M.Asp9H10ORFAP (100% identity) | M.AmaUM7ORF16015P | |
| 16020 | transmembrane protein | |||