Alteromonas macleodii 'Aegean Sea MED64' |
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Putative Alteromonas macleodii 'Aegean Sea MED64' RM systems
Ref: Lopez-Perez,M. et al. Genome Biol Evol 5 (6), 1220-1232 (2013)
REBASE ref # 16173
Complete sequence: 4,397,537 bp
GenBank #: CP004848
REBASE acronym: Ama64
Org_num: 10810
All begin I533_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5475 | 316 aa hypothetical protein | |||
| 5480 | M | M.VchSXTORFAP (100% identity) | M.Ama64ORF5480P | |
| 5485 | S | S.VchSXTORFAP (100% identity) | S.Ama64ORF5480P | |
| 5490 | Restriction endonuclease | |||
| 5495 | R | VchSXTORFAP (100% identity) | Ama64ORF5480P | |
| 5500 | ATPase AAA | |||
| 13925 | 301 aa hypothetical protein | |||
| 13930 | M | M1.Pte16098ORF8765P (94% identity) | M1.Ama64ORF13930P | |
| 13935 | M | M2.VpaS145ORFAP (95% identity) | M2.Ama64ORF13930P | |
| 13940 | S | S.PbrMORFCP (78% identity) | S.Ama64ORF13930P | |
| 13945 | R | Ugp5015ORF1983P (93% identity) | Ama64ORF13930P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2205 | 66 aa hypothetical protein | |||
| 2210 | M | M.AspG91ORFAP (100% identity) | GATC | M.Ama64DamP |
| 2215 | DamX-like protein | |||
| 2445 | 98 aa hypothetical protein | |||
| 2450 | R | Vhafi2ORFGP (85% identity) | GTCGAC | Ama64ORF2455P |
| 2455 | M | M.Vhafi2ORFGP (79% identity) | GTCGAC | M.Ama64ORF2455P |
| 2460 | 130 aa hypothetical protein | |||
| 5485 | restriction modification system DNA specificity | |||
| 5490 | R | Vch2387ORFEP (100% identity) | Ama64ORF5490P | |
| 5495 | type I restriction-modification system | |||
| 15125 | 76 aa hypothetical protein | |||
| 15130 | M | M.Ama615ORF16635P (100% identity) | M.Ama64ORF15130P | |
| 15150 | transposase-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5495 | type I restriction-modification system | |||
| 5500 | R | VchSXTMcrBP (100% identity) | Ama64McrBP | |
| 5505 | R | VchSXTMcrCP (100% identity) | Ama64McrCP | |
| 5510 | 284 aa hypothetical protein | |||
| 5505 | 5-methylcytosine-specific restriction enzyme | |||
| 5510 | R | Vch216MrrP (100% identity) | Ama64MrrP | |
| 5515 | 93 aa hypothetical protein | |||