Alteromonas macleodii 'English Channel 615' |
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Putative Alteromonas macleodii 'English Channel 615' RM systems
Ref: Lopez-Perez,M. et al. Genome Biol Evol 5 (6), 1220-1232 (2013)
REBASE ref # 16173
| Sequence length: | GenBank #: | |
| Chromosome: | 4,381,505 bp | CP004846 |
| plasmid unnamed: | 200,847 bp | CP004847 |
REBASE acronym: Ama615
Org_num: 10809
All begin I633_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4500 | 193 aa hypothetical protein | |||
| ??? | M | M1.Pte16098ORF8765P (94% identity) | M1.Ama615ORF4520P | |
| 4520 | M | M2.VpaS145ORFAP (96% identity) | M2.Ama615ORF4520P | |
| 4525 | S | S1.Vsi48ORF16075P (33% identity) | S.Ama615ORF4520P | |
| 4530 | R | Pte16098ORF8765P (97% identity) | Ama615ORF4520P | |
| 4535 | 174 aa hypothetical protein | |||
| 15255 | 257 aa hypothetical protein | |||
| ??? | R | Cza7MEORF2465P (90% identity) | Ama615ORF15290P | |
| 15270 | 389 aa hypothetical protein | |||
| 15275 | S | S.Dph13687ORF870P (48% identity) | S.Ama615ORF15290P | |
| ??? | M | Type I restriction-modification system DNA methylase | M.Ama615ORF15290BP | |
| 15290 | M | M.AagBL06ORF5767P (35% identity) | M.Ama615ORF15290AP | |
| 15295 | excisionase family DNA binding domain | |||
| 21250 | 76 aa hypothetical protein | |||
| 21255 | M | M.Aha174ORF3425P (99% identity) | M.Ama615ORF21255P | |
| 21260 | DNA-damage-inducible protein D | |||
| 21265 | S | S.Cch9127ORFDP (56% identity) | S.Ama615ORF21255P | |
| ??? | R | Cch9127ORFDP (98% identity) | Ama615ORF21255P | |
| 21280 | 248 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2270 | 66 aa hypothetical protein | |||
| 2275 | M | M.AspG91ORFAP (100% identity) | GATC | M.Ama615DamP |
| 2280 | DamX-like protein | |||
| 16630 | 512 aa hypothetical protein | |||
| 16635 | M | M.Ama64ORF15130P (100% identity) | M.Ama615ORF16635P | |
| 16640 | transmembrane protein | |||
| plasmid unnamed | ||||
| 22386 | 573 aa hypothetical protein | |||
| 22391 | M | 613 aa hypothetical protein | M.Ama615ORF22391P | |
| 22396 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 655 | 331 aa hypothetical protein | |||
| 660 | R | AspRW2A1MrrP (65% identity) | Ama615Mrr2P | |
| 675 | type 11 methyltransferase | |||
| 16635 | D12 class N6 adenine-specific DNA | |||
| 16640 | R | AspKC3MrrP (88% identity) | Ama615MrrP | |
| 16645 | 249 aa hypothetical protein | |||