Sorangium cellulosum So0157-2 |
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Putative Sorangium cellulosum So0157-2 RM systems
Ref: Han,K. et al. Sci Rep 3, 2101 (2013)
REBASE ref # 16172
Complete sequence: 14,782,125 bp
GenBank #: CP003969
REBASE acronym: Sce1572
Org_num: 10808
All begin SCE1572_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6945 | 732 aa hypothetical protein | |||
| 6950 | M | M.Sce12ORFAP (89% identity) | M.Sce1572ORF6950P | |
| 6955 | 199 aa hypothetical protein | |||
| 29140 | 96 aa hypothetical protein | |||
| 29145 | M | M.Nex71ORF1166P (74% identity) | M.Sce1572ORF29145P | |
| 29150 | S | S.BglR93ORFAP (28% identity) | S.Sce1572ORF29145P | |
| 29155 | R | Nex71ORF1166P (67% identity) | Sce1572ORF29145P | |
| 33445 | M | M.Ssp836ORF6997P (97% identity) | M.Sce1572ORF33445P | |
| 33450 | S | S.Ssp836ORF6997P (94% identity) | S.Sce1572ORF33445P | |
| 33455 | 278 aa hypothetical protein | |||
| 47035 | 230 aa hypothetical protein | |||
| 47040 | S | S.Ssp836ORF9524P (88% identity) | S.Sce1572ORF47045P | |
| 47045 | M | M.Ssp836ORF9524P (91% identity) | M.Sce1572ORF47045P | |
| 47055 | major facilitator transporter | |||
| 47905 | 347 aa hypothetical protein | |||
| 47910 | M | M.SceGT47ORF25940P (74% identity) | M.Sce1572ORF47910P | |
| 47915 | S | S.AsaLFORF1792P (28% identity) | S.Sce1572ORF47910P | |
| 47920 | 374 aa hypothetical protein | |||
| 47925 | R | SceGT47ORF25940P (83% identity) | Sce1572ORF47910P | |
| 47930 | 229 aa hypothetical protein | |||
| 49335 | R | Age2261IIIP (61% identity) | Sce1572ORF49355P | |
| ??? | S | S.LspHIORF13440P (27% identity) | S1.Sce1572ORF49355P | |
| 49340 | S | S.Sth20745II (12% identity) | S2.Sce1572ORF49355P | |
| 49345 | 321 aa hypothetical protein | |||
| 49350 | 145 aa hypothetical protein | |||
| 49355 | M | M.Sce26ORF100720P (97% identity) | M.Sce1572ORF49355P | |
| 49360 | 352 aa hypothetical protein | |||
| 49645 | 156 aa hypothetical protein | |||
| 49650 | M | M.Ssp836ORF10104P (93% identity) | M.Sce1572ORF49650P | |
| 49655 | 101 aa hypothetical protein | |||
| 49660 | 214 aa hypothetical protein | |||
| 49665 | R | Ssp836ORF10104P (97% identity) | Sce1572ORF49650P | |
| 49670 | 239 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2515 | 773 aa hypothetical protein | |||
| 2520 | M | M.Ssp836ORF560P (97% identity) | CTCGAG | M.Sce1572ORF2520P |
| 2525 | 41 aa hypothetical protein | |||
| 12675 | 323 aa hypothetical protein | |||
| 12680 | M | Ssp836ORF2653P (44% identity) | M.Sce1572ORF12680P | |
| 12685 | 122 aa hypothetical protein | |||
| 17065 | 88 aa hypothetical protein | |||
| 17070 | M | M.Ssp836ORF3558P (97% identity) | M.Sce1572ORF17070P | |
| 17075 | 323 aa hypothetical protein | |||
| 19390 | 167 aa hypothetical protein | |||
| 19395 | RM | SceSoORF3242P (85% identity) | Sce1572ORF19395P | |
| 19400 | 1214 aa hypothetical protein | |||
| 42795 | 319 aa hypothetical protein | |||
| 42800 | M | M.Ssp836ORF8715P (95% identity) | GACNNNGTC | M.Sce1572ORF42800P |
| 42805 | 237 aa hypothetical protein | |||
| 46800 | 156 aa hypothetical protein | |||
| 46805 | RM | Ssp836ORF9507P (93% identity) | Sce1572ORF46805P | |
| 46810 | 221 aa hypothetical protein | |||
| 49520 | 86 aa hypothetical protein | |||
| 49525 | M | M.Ssp836ORF10078P (96% identity) | CTGCAG | M.Sce1572ORF49525P |
| 49530 | peptidase S46 | |||
| 52655 | 298 aa hypothetical protein | |||
| 52660 | M | M.Ssp836ORF10695P (98% identity) | M.Sce1572ORF52660P | |
| 52665 | 461 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8030 | 127 aa hypothetical protein | |||
| 8035 | R | Mth6362ORF2876P (63% identity) | Sce1572ORF8040P | |
| 8040 | M | M.Vsp20II (57% identity) | M.Sce1572ORF8040P | |
| 8045 | 71 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19200 | 30 aa hypothetical protein | |||
| 19205 | R | Msp3SDU6ORF30605P (52% identity) | Sce1572ORF19205P | |
| 19210 | 774 aa hypothetical protein | |||
| 31070 | 295 aa hypothetical protein | |||
| ??? | R | Ssp836MrrP (87% identity) | Sce1572MrrP | |
| 31075 | 90 aa hypothetical protein | |||