Ferroplasma acidarmanus fer1 |
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Putative Ferroplasma acidarmanus fer1 RM systems
Ref: Allen,E.E. et al. Proc. Natl. Acad. Sci. U.S.A. 104 (6), 1883-1888 (2007)
REBASE ref # 16147
Complete sequence: 1,935,211 bp
GenBank #: CP004145
REBASE acronym: FacFer1
Org_num: 3289
All begin FACI_IFERC00001G
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1236 | 341 aa hypothetical protein | |||
| 1237 | M | M.FacFer1ORF1414P (21% identity) | M.FacFer1ORF1237P | |
| 1238 | cation efflux integral membrane protein | |||
| 1413 | 125 aa hypothetical protein | |||
| 1414 | M | M.EsaRM75ORFAP (96% identity) | M.FacFer1ORF1414P | |
| ??? | S | S.MjaVII (39% identity) | S.FacFer1ORF1414P | |
| 1416 | R | EsaRM73ORFAP (94% identity) | FacFer1ORF1414P | |
| 1417 | 145 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22 | 1254 aa hypothetical protein | |||
| 23 | V | V.MmaGORF278P (43% identity) | V.FacFer1ORF24P | |
| 24 | M | M.BlaB9ORF7355P (43% identity) | M.FacFer1ORF24P | |
| 25 | 878 aa hypothetical protein | |||
| 349 | 261 aa hypothetical protein | |||
| 350 | M | M.FacYORF1269P (96% identity) | M.FacFer1ORF350P | |
| 351 | 548 aa hypothetical protein | |||
| 454 | 62 aa hypothetical protein | |||
| ??? | M | M.Mar14ORF435P (49% identity) | M1.FacFer1ORF455P | |
| 456 | M | M.SacHS1ORF1592P (39% identity) | M2.FacFer1ORF455P | |
| 457 | transposase, IS605 OrfB family protein | |||
| 577 | 94 aa hypothetical protein | |||
| ??? | M | M.DspBuS5ORF567P (53% identity) | CTAG | M.FacFer1ORF578P |
| 579 | R | MspLAm1ORF4650P (66% identity) | CTAG | FacFer1ORF578P |
| 580 | integrase/recombinase | |||
| 756 | DNA-directed RNA polymerase subunit L | |||
| ??? | M | M.FacAORFAP (98% identity) | M.FacFer1ORF757P | |
| 758 | 1024 aa hypothetical protein | |||
| 1435 | 326 aa hypothetical protein | |||
| 1436 | M | M.ThaII (59% identity) | GATC | M.FacFer1ORF1436P |
| 1437 | 138 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1389 | 435 aa hypothetical protein | |||
| 1390 | M | M.UbaMDORFD10P (66% identity) | M.FacFer1ORF1390P | |
| 1391 | R | UbaMDORFQ11P (71% identity) | FacFer1ORF1390P | |
| 1392 | 321 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1886 | 371 aa hypothetical protein | |||
| 1887 | R | MluB10ORFAP (26% identity) | FacFer1ORF1887P | |
| 1888 | 217 aa hypothetical protein | |||