Avibacterium paragallinarum 221 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Avibacterium paragallinarum 221 RM systems
Ref: Xu,F. et al. Genome Announc 1 (3), E00290-13 (2013)
REBASE ref # 15989
Contig set: 2,668,385 bp
GenBank #: AOGF00000000 (NZ_AOGF00000000)
REBASE acronym: Apa221
Org_num: 10654
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | ApasMORFBP (66% identity) | Apa221ORFHP | |
| ??? | M | M.ApasMORFBP (97% identity) | M.Apa221ORFGP | |
| ??? | S | S.Apa4211ORF1700P (100% identity) | S.Apa221ORFGP | |
| ??? | S | S.Apa4211ORF2270P (100% identity) | S.Apa221ORFBP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Apa11296ORF1017P (49% identity) | BA | M.Apa221ORFWP |
| ??? | M | hypothetical protein | M.Apa221ORFYP | |
| ??? | M | DNA-cytosine methyltransferase | M.Apa221ORFNP | |
| ??? | M | DNA-cytosine methyltransferase | M.Apa221ORFOP | |
| ??? | M | M.Apa4211ORF190P (71% identity) | BA | M.Apa221ORFQP |
| ??? | M | M2.Apa4211ORFAP (100% identity) | CATG | M1.Apa221ORFSP |
| ??? | R | Apa4211ORFAP (100% identity) | CATG | Apa221ORFSP |
| ??? | M | M1.Apa4211ORFAP (100% identity) | CATG | M2.Apa221ORFSP |
| ??? | M | M.Apa221ORFQP (95% identity) | BA | M.Apa221ORFUP |
| ??? | M | M.Apa11296ORF3104P (95% identity) | M.Apa221ORFVP | |
| ??? | M | M.Apa4211ORF2010P (100% identity) | GATC | M.Apa221ORFJP |
| ??? | M | M.ApasMORFNP (100% identity) | GATC | M.Apa221ORFPP |
| ??? | M | M.Apa4211ORF770P (100% identity) | GCGC | M.Apa221ORFTP |
| ??? | R | ApaESV135ORF2500P (100% identity) | GCGC | Apa221ORFTP |
| ??? | R | ApasMORFEP (100% identity) | CCNGG | Apa221ORFKP |
| ??? | M | M.ApasMORFEP (100% identity) | CCNGG | M.Apa221ORFKP |
| ??? | M | M.Apa4211ORF320P (100% identity) | GATC | M.Apa221ORFRP |
| ??? | RM | Apa4211ORF340P (100% identity) | Apa221ORFFP | |
| ??? | RM | Apa4211ORF480AP (100% identity) | Apa221ORFCP | |
| ??? | type III restriction endonuclease | |||
| ??? | type III restriction system methylase | |||
| ??? | RM | Apa4211ORF480BP (99% identity) | Apa221ORFDP | |
| ??? | type III restriction enzyme, res subunit | |||
| ??? | type III restriction endonuclease | |||
| ??? | RM | Apa4211ORF480CP (100% identity) | Apa221ORFEP | |
| ??? | RM | ApasMORFIP (100% identity) | Apa221ORFAP | |
| ??? | S | S1.ApasMORFIP (65% identity) | S.Apa221ORFAP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Apa10926ORF2398P (96% identity) | M.Apa221ORFMP | |
| ??? | R | Apa4211ORF310P (100% identity) | Apa221ORFMP | |
| ??? | M | M2.Apa4211ORF140P (99% identity) | M1.Apa221ORFIP | |
| ??? | M | M.Apa11296I (97% identity) | M2.Apa221ORFIP | |
| ??? | R | Apa4211ORF140P (100% identity) | Apa221ORFIP | |