Methanobrevibacter species AbM4 |
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Putative Methanobrevibacter species AbM4 RM systems
Ref: Leahy,S.C. et al. unpublished
REBASE ref # 16483
Complete sequence: 1,998,189 bp
GenBank #: CP004050
REBASE acronym: Msp4
Org_num: 10648
All begin Abm4_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 74 | 112 aa hypothetical protein | |||
| 75 | M | M.MsmKB11ORF2645P (65% identity) | M.Msp4ORF75P | |
| 76 | S | S.Efa1112ORFAP (39% identity) | S.Msp4ORF75P | |
| 77 | R | MarANOR1ORFAP (61% identity) | Msp4ORF75P | |
| 78 | 126 aa hypothetical protein | |||
| 517 | 264 aa hypothetical protein | |||
| 518 | R | MspJH1ORFEP (99% identity) | Msp4ORF520P | |
| 519 | S | S1.MspJH1ORFEP (100% identity) | S1.Msp4ORF520P | |
| 520 | M | M.MspJH1ORFEP (98% identity) | M.Msp4ORF520P | |
| 521 | S | S3.MspJH1ORFEP (35% identity) | S2.Msp4ORF520P | |
| 522 | S | type I restriction-modification system S subunit | S3.Msp4ORF520P | |
| 523 | phage integrase family protein | |||
| 524 | S | S.BspM204ORF1455P (38% identity) | S4.Msp4ORF520P | |
| 525 | MiaB-like tRNA modifying enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 95 | adhesin-like protein with transglutaminase | |||
| 96 | M | M.UbaMDORFH4P (56% identity) | GTSAC | M.Msp4ORF96P |
| 97 | R | HpyKH39ORFPP (46% identity) | GTSAC | Msp4ORF96P |
| 98 | Hef nuclease | |||
| 1016 | 343 aa hypothetical protein | |||
| 1017 | R | MstDORF143P (54% identity) | GATC | Msp4ORF1018P |
| 1018 | M | M.MstDORF143P (59% identity) | GATC | M.Msp4ORF1018P |
| 1019 | metallophosphoesterase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 83 | ssDNA exonuclease RecJ1 | |||
| 84 | R | Mcu11139ORF10280P (61% identity) | Msp4ORF85P | |
| ??? | M | M.MspSWAN1ORF832P (21% identity) | M.Msp4ORF85P | |
| 86 | 396 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 102 | 219 aa hypothetical protein | |||
| 103 | R | restriction endonuclease | Msp4ORF103P | |
| 105 | CRISPR-associated endoribonuclease Cas2 | |||
| 1030 | hydrolase HAD superfamily | |||
| 1031 | R | MspJH1ORFAP (99% identity) | Msp4ORF1031P | |
| 1032 | NUDIX domain-containing protein | |||
| 1108 | formylmethanofuran dehydrogenase subunit E | |||
| ??? | R | MspJH1McrBP (86% identity) | Msp4McrBP | |
| 1111 | R | restriction enzyme modulator protein | Msp4McrCP | |
| 1112 | seryl-tRNA synthetase SerS | |||