Salmonella enterica subsp. enterica serovar Typhi Ty21a |
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Putative Salmonella enterica subsp. enterica serovar Typhi Ty21a RM systems
Ref: Xu,D. et al. unpublished
REBASE ref # 16395
Complete sequence: 4,791,958 bp
GenBank #: CP002099
REBASE acronym: Sen21a
Org_num: 10593
All begin TY21A_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23285 | endoribonuclease SymE | |||
| 23290 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen21aORFAP |
| ??? | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.Sen21aORFAP |
| 23305 | R | StyTORF4575P (99% identity) | GAANNNNNNNNTCGC | Sen21aORFAP |
| 23310 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9730 | 173 aa hypothetical protein | |||
| 9735 | M | M.StyTORF1914P (100% identity) | M.Sen21aORF9735P | |
| 9740 | 174 aa hypothetical protein | |||
| 9795 | bacteriophage protein | |||
| ??? | M | M.StyTORF1926P (100% identity) | GATC | M.Sen21aORF9800P |
| 9805 | 79 aa hypothetical protein | |||
| 16740 | DNA-binding protein Fis | |||
| 16745 | M | methyltransferase | ATGCAT | M.Sen21aORF16745P |
| 16750 | periplasmic protein | |||
| 20450 | 425 aa hypothetical protein | |||
| 20455 | M | DNA adenine methylase | GATC | M.Sen21aDamP |
| 20460 | ribulose-phosphate 3-epimerase | |||
| 22045 | 802 aa hypothetical protein | |||
| 22050 | M | M.StyTORF4329P (100% identity) | GATC | M.Sen21aORF22050P |
| 22055 | exonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4470 | PilV-like protein | |||
| 4475 | R | StyTORF872P (100% identity) | Sen21aORF4480P | |
| 4480 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen21aORF4480P | |
| 4485 | SpnT protein | |||
| 12715 | terminal oxidase subunit I | |||
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen21aORF12730P |
| 12730 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen21aORF12730P |
| 12735 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23305 | type I restriction enzyme EcoKI subunit R | |||
| 23310 | R | StyTMrrP (100% identity) | Sen21aMrrP | |
| 23315 | 95 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17245 | DksA/TraR protein family with a zinc | |||
| 17250 | M | M.StyTORF3409P (99% identity) | GATC | M.Sen21aORF17250P |
| 17255 | endonuclease | |||