Ref: Ribeiro,F. et al. Genome Res. (2012) In press

REBASE ref # 15737

Sequence length:GenBank #:
Chromosome: 2,233,640 bp CP003909
Chromosome: (contig set) AKCH00000000

REBASE acronym: NgoM

Org_num: 1858

 

All begin NGFG_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
557 ADP-L-glycero-D-manno-heptose-6-epimerase
558 M M.Ngos1291ORF7750P (100% identity) GCANNNNNNNNTGC M.NgoMORF558P
559 DNA-damage-inducible protein D
560 S S.Ngos1291ORF7750P (100% identity) GCANNNNNNNNTGC S.NgoMORF558P
561 R NgoMS11ORF4820P (100% identity) GCANNNNNNNNTGC NgoMORF558P
562 ATP-dependent Clp protease ATP-binding subunit
 
1096 recombination factor protein R
1095 R NgoWLIP (99% identity) GAGNNNNNTAC NgoMORF1095P
1094 77 aa hypothetical protein
1093 S S.NgoWSI (100% identity) GAGNNNNNTAC S.NgoMORF1095P
1092 186 aa hypothetical protein
1091 280 aa hypothetical protein
1090 M M.NgoNG250ORF4770P (100% identity) GAGNNNNNTAC M.NgoMORF1095P
1088 3,4-dihydroxy-2-butanone 4-phosphate synthase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
143 leucyl-tRNA synthetase
144 R NgoPID18ORF231P (100% identity) GATC NgoMORF146P
??? M M.NgoWOORF8P (100% identity) GATC M.NgoMORF146P
147 151 aa hypothetical protein
 
444 phenylalanyl-tRNA synthetase alpha chain
445 V V.NgoWSORF391P (100% identity) V.NgoMORF446P
??? M M.NgoAXIIIP (100% identity) M.NgoMORF446P
448 R Npo18661ORFHP (100% identity) NgoMORF446P
449 phenylalanyl-tRNA synthetase beta chain
 
506 215 aa hypothetical protein
507 RM Ngos1291ORF7515P (100% identity) GACNNNNNTGA NgoMORF507P
508 S S.NgoWSORF450P (100% identity) GACNNNNNTGA S.NgoMORF507P
509 140 aa hypothetical protein
 
513 uroporphyrinogen decarboxylase
514 H H.Ngos1291ORF7560P (100% identity) H.NgoMORF516P
515 R Ngos1291ORF7560P (100% identity) GCSGC NgoMORF516P
516 M M.Ngos1291ORF7560P (100% identity) GCSGC M.NgoMORF516P
517 39 aa hypothetical protein
 
1123 3-isopropylmalate dehydrogenase
1122 R Ngos1291ORF9120P (100% identity) GGNNCC NgoMV
1121 M modification methylase NlaIV GGNNCC M.NgoMV
1120 3-isopropylmalate dehydratase small subunit
 
856 anthranilate synthase component 1
855 M M.NgoWLORF1156P (100% identity) GCCGGC M.NgoMIV
854 R Ngos1291ORF10080P (100% identity) GCCGGC NgoMIV
853 phosphoribosylaminoimidazole carboxylase, ATPase
 
2389 replication initiation factor
2180 V V.Ngos1291ORF65P (100% identity) V.NgoMORF2182P
2181 R NgoWSORF1801P (100% identity) CCGG NgoMORF2182P
2182 M M.NgoMS11ORF8845P (100% identity) CCGG M.NgoMORF2182P
2183 48 aa hypothetical protein
 
2012 UvrABC system protein A
2013 R Ngos1291ORF260P (100% identity) CCGCGG NgoMIII
2014 M M.Ngos1291ORF260P (100% identity) CCGCGG M.NgoMIII
2015 137 aa hypothetical protein
 
1706 375 aa hypothetical protein
??? R NgoMS11ORF580P (100% identity) GGCC NgoMIIP
1709 M M.Ngos1291ORF3515P (100% identity) GGCC M.NgoMII
1710 ribosome-recycling factor
 
2469 105 aa hypothetical protein
1805 R NgoWSIIIP (100% identity) GGTGA NgoMVIII
1806 M M1.Ngos1291ORF4080P (100% identity) GGTGA M2.NgoMVIII
2470 M M2.Ngos1291ORF4080P (100% identity) GGTGA M1.NgoMVIIIP
1809 competence protein ComEA helix-hairpin-helix
 
1895 GTPase obg
1894 M M.Ngos1291ORF4640P (100% identity) RGCGCY M.NgoMI
1893 R Ngos1291ORF4640P (100% identity) RGCGCY NgoMI
1892 cysteinyl-tRNA synthetase
 
Chromosome
 
??? M M2.Ngos1291ORF4080P (100% identity) GGTGA M1.NgoMVIIIP
??? M M1.Ngos1291ORF4080P (100% identity) GGTGA M2.NgoMVIII
??? R NgoWSIIIP (100% identity) GGTGA NgoMVIII
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
1161 L-lactate dehydrogenase
1160 R NgoWSORF749P (100% identity) GCAGA NgoMORF1159P
1159 M M.NgoMS11ORF5990P (100% identity) GCAGA M.NgoMORF1159P
1158 tRNA pseudouridine synthase B