Neisseria gonorrhoeae MS11 |
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Putative Neisseria gonorrhoeae MS11 RM systems
Ref: Ribeiro,F. et al. Genome Res. (2012) In press
REBASE ref # 15737
| Sequence length: | GenBank #: | |
| Chromosome: | 2,233,640 bp | CP003909 |
| Chromosome: | (contig set) | AKCH00000000 |
REBASE acronym: NgoM
Org_num: 1858
All begin NGFG_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 557 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 558 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNNTGC | M.NgoMORF558P |
| 559 | DNA-damage-inducible protein D | |||
| 560 | S | S.Ngos1291ORF7750P (100% identity) | GCANNNNNNNNTGC | S.NgoMORF558P |
| 561 | R | NgoMS11ORF4820P (100% identity) | GCANNNNNNNNTGC | NgoMORF558P |
| 562 | ATP-dependent Clp protease ATP-binding subunit | |||
| 1096 | recombination factor protein R | |||
| 1095 | R | NgoWLIP (99% identity) | GAGNNNNNTAC | NgoMORF1095P |
| 1094 | 77 aa hypothetical protein | |||
| 1093 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoMORF1095P |
| 1092 | 186 aa hypothetical protein | |||
| 1091 | 280 aa hypothetical protein | |||
| 1090 | M | M.NgoNG250ORF4770P (100% identity) | GAGNNNNNTAC | M.NgoMORF1095P |
| 1088 | 3,4-dihydroxy-2-butanone 4-phosphate synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 143 | leucyl-tRNA synthetase | |||
| 144 | R | NgoPID18ORF231P (100% identity) | GATC | NgoMORF146P |
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.NgoMORF146P |
| 147 | 151 aa hypothetical protein | |||
| 444 | phenylalanyl-tRNA synthetase alpha chain | |||
| 445 | V | V.NgoWSORF391P (100% identity) | V.NgoMORF446P | |
| ??? | M | M.NgoAXIIIP (100% identity) | M.NgoMORF446P | |
| 448 | R | Npo18661ORFHP (100% identity) | NgoMORF446P | |
| 449 | phenylalanyl-tRNA synthetase beta chain | |||
| 506 | 215 aa hypothetical protein | |||
| 507 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoMORF507P |
| 508 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoMORF507P |
| 509 | 140 aa hypothetical protein | |||
| 513 | uroporphyrinogen decarboxylase | |||
| 514 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoMORF516P | |
| 515 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoMORF516P |
| 516 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoMORF516P |
| 517 | 39 aa hypothetical protein | |||
| 1123 | 3-isopropylmalate dehydrogenase | |||
| 1122 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | NgoMV |
| 1121 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoMV |
| 1120 | 3-isopropylmalate dehydratase small subunit | |||
| 856 | anthranilate synthase component 1 | |||
| 855 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoMIV |
| 854 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoMIV |
| 853 | phosphoribosylaminoimidazole carboxylase, ATPase | |||
| 2389 | replication initiation factor | |||
| 2180 | V | V.Ngos1291ORF65P (100% identity) | V.NgoMORF2182P | |
| 2181 | R | NgoWSORF1801P (100% identity) | CCGG | NgoMORF2182P |
| 2182 | M | M.NgoMS11ORF8845P (100% identity) | CCGG | M.NgoMORF2182P |
| 2183 | 48 aa hypothetical protein | |||
| 2012 | UvrABC system protein A | |||
| 2013 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoMIII |
| 2014 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoMIII |
| 2015 | 137 aa hypothetical protein | |||
| 1706 | 375 aa hypothetical protein | |||
| ??? | R | NgoMS11ORF580P (100% identity) | GGCC | NgoMIIP |
| 1709 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoMII |
| 1710 | ribosome-recycling factor | |||
| 2469 | 105 aa hypothetical protein | |||
| 1805 | R | NgoWSIIIP (100% identity) | GGTGA | NgoMVIII |
| 1806 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.NgoMVIII |
| 2470 | M | M2.Ngos1291II (100% identity) | GGTGA | M1.NgoMVIIIP |
| 1809 | competence protein ComEA helix-hairpin-helix | |||
| 1895 | GTPase obg | |||
| 1894 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoMI |
| 1893 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoMI |
| 1892 | cysteinyl-tRNA synthetase | |||
| Chromosome | ||||
| ??? | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoMIII |
| ??? | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoMIII |
| ??? | M | M2.Ngos1291II (100% identity) | GGTGA | M1.NgoMVIIIP |
| ??? | M | M1.Ngos1291II (100% identity) | GGTGA | M2.NgoMVIII |
| ??? | R | NgoWSIIIP (100% identity) | GGTGA | NgoMVIII |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1161 | L-lactate dehydrogenase | |||
| 1160 | R | NgoWSORF749P (100% identity) | GCAGA | NgoMORF1159P |
| 1159 | M | M.NgoMS11ORF5990P (100% identity) | GCAGA | M.NgoMORF1159P |
| 1158 | tRNA pseudouridine synthase B | |||