Neisseria gonorrhoeae FA19 |
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Putative Neisseria gonorrhoeae FA19 RM systems
Ref: Ribeiro,F. et al. Genome Res. (2012) In press
REBASE ref # 15737
Contig set: 2,218,031 bp
GenBank #: AKCG00000000 (NZ_AKCG00000000)
REBASE acronym: NgoFA19
Org_num: 8042
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | NgoFA19IIIP |
| ??? | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.NgoFA19III |
| ??? | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.NgoFA19III |
| ??? | M | M.Ngo9399ORF2075P (100% identity) | M.NgoFA19ORF148P | |
| ??? | S | S.NgoWNII (50% identity) | S1.NgoFA19ORF148P | |
| ??? | S | S2.NgoWSII (100% identity) | S2.NgoFA19ORF148P | |
| ??? | R | NgoWNIIP (100% identity) | NgoFA19ORF148P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | V | V.Ngos1291ORF65P (100% identity) | V.NgoFA19ORFKP | |
| ??? | R | NgoWSORF1801P (98% identity) | CCGG | NgoFA19ORFKP |
| ??? | M | M.NgoG2891ORFBP (100% identity) | CCGG | M.NgoFA19ORFKP |
| ??? | R | Ngos1291ORF5750P (100% identity) | GATC | NgoFA19ORF2038P |
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.NgoFA19ORF2038P |
| ??? | type II restriction endonuclease | |||
| ??? | M | M.NgoWSORF8P (100% identity) | GATC | M.NgoFA19ORFFP |
| ??? | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoFA19ORF667P |
| ??? | R | NgoFQ01ORF4235P (99% identity) | GCCGGC | NgoFA19ORF667P |
| ??? | V | V.NgoWSORF391P (100% identity) | V.NgoFA19ORF43P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoFA19ORF43P | |
| ??? | R | Npo18661ORFHP (100% identity) | NgoFA19ORF43P | |
| ??? | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoFA19ORF100P |
| ??? | S | S.Ngo9399ORF1840P (100% identity) | S.NgoFA19ORF100P | |
| ??? | 629 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.NgoSW0032ORF2780P (100% identity) | CCACC | M.NgoFA19II |
| ??? | R | Ngos1291ORF8455P (99% identity) | CCACC | NgoFA19IIP |
| ??? | R | Ngo9399ORF5165P (100% identity) | NgoFA19ORF379P | |
| ??? | M | M.Ngo9126ORF3235P (98% identity) | M.NgoFA19ORF379P | |