Campylobacter upsaliensis JV21 |
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Putative Campylobacter upsaliensis JV21 RM systems
Ref: Muzny,D. et al. unpublished
REBASE ref # 12340
Contig set: 1,621,689 bp
GenBank #: AEPU00000000 (NZ_AEPU00000000)
REBASE acronym: Cup21
Org_num: 8233
All begin HMPREF9400_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1476 | colicin tolerance family protein (tolB) | |||
| 1477 | M | M.Cup736ORF1225P (100% identity) | M.Cup21ORF1477P | |
| 1478 | R | Cup736ORF1225P (100% identity) | Cup21ORF1477P | |
| 1479 | S | S.Cup736ORF1225P (99% identity) | S.Cup21ORF1477P | |
| 1480 | TonB domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1542 | DNA topoisomerase TopA | |||
| 1543 | M | M.Cup736ORF1545P (100% identity) | TCNNGA | M.Cup21ORF1543P |
| 1544 | 194 aa conserved hypothetical protein | |||
| 1545 | glutamate synthase alpha subunit | |||
| 1546 | M | M.Cup3940ORF1640P (99% identity) | GCNNGC | M.Cup21ORF1546P |
| 1547 | R | Cup736ORF1560P (100% identity) | GCNNGC | Cup21ORF1546P |
| 1548 | glutamate synthase beta subunit | |||
| 1550 | RNA pseudouridine synthase | |||
| 1551 | M | M1.Cup197059ORF1660P (99% identity) | GATGG | M1.Cup21ORF1551P |
| 1552 | M | M2.Cup3940ORF1645P (100% identity) | CCATC | M2.Cup21ORF1551P |
| 1553 | R | Cup736ORF1585P (100% identity) | CCATC | Cup21ORF1551P |
| 1554 | crossover junction endoribonuclease subunit C | |||