Veillonella parvula ATCC 17745 |
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Putative Veillonella parvula ATCC 17745 RM systems
Ref: Durkin,A.S. et al. unpublished
REBASE ref # 11451
Contig set: 2,163,473 bp
GenBank #: ADFU00000000 (NZ_ADFU00000000)
REBASE acronym: VpaV
Org_num: 5970
All begin HMPREF1035_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1781 | 613 aa hypothetical protein | |||
| 1782 | S | S3.Vpa2007ORF3215P (62% identity) | S1.VpaVORF1785P | |
| 1783 | site-specific recombinase, phage integrase | |||
| 1784 | S | S1.Vpa2007ORF3215P (100% identity) | S2.VpaVORF1785P | |
| 1785 | M | M.Vpa2007ORF3215P (100% identity) | M.VpaVORF1785P | |
| 1786 | 282 aa hypothetical protein | |||
| 1787 | 104 aa hypothetical protein | |||
| 1788 | S | S2.Vpa2007ORF3215P (99% identity) | S3.VpaVORF1785P | |
| 1789 | R | Vpa2007ORF3215P (100% identity) | VpaVORF1785P | |
| 1790 | S | S4.Vpa2007ORF3215P (100% identity) | S4.VpaVORF1785P | |
| 1791 | 443 aa hypothetical protein | |||
| 394 | 278 aa hypothetical protein | |||
| 395 | R | Vpa2007ORF210P (100% identity) | VpaVORF397P | |
| 396 | S | S.Vpa2007ORF210P (100% identity) | S.VpaVORF397P | |
| 397 | M | M.Vpa2007ORF210P (100% identity) | M.VpaVORF397P | |
| 398 | 177 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 512 | 391 aa hypothetical protein | |||
| ??? | M | M.Vpa2007ORF9655P (100% identity) | M.VpaVORF513P | |
| 515 | DNA gyrase, A subunit | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1779 | integrase core domain protein | |||
| 1780 | R | Vpa2007McrCP (100% identity) | VpaVMcrCP | |
| 1781 | 613 aa hypothetical protein | |||
| 1780 | 445 aa hypothetical protein | |||
| 1781 | R | Vpa2007McrBP (100% identity) | VpaVMcrBP | |
| 1782 | 113 aa hypothetical protein | |||
| 836 | 309 aa hypothetical protein | |||
| 837 | R | Vpa2007ORF7970P (100% identity) | VpaVORFDP | |
| 838 | mutator mutT protein | |||