Prevotella copri DSM 18205 |
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Putative Prevotella copri DSM 18205 RM systems
Ref: Fulton,L. et al. unpublished
REBASE ref # 11238
Contig set: 3,507,873 bp
GenBank #: ACBX00000000 (NZ_ACBX00000000)
REBASE acronym: Pco
Org_num: 5714
All begin PREVCOP_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5690 | S | S3.Pca1573ORF4930P (100% identity) | S1.PcoORF5694P | |
| 5691 | site-specific recombinase, phage integrase | |||
| 5692 | S | S2.Pco18205ORF9105P (100% identity) | S2.PcoORF5694P | |
| 5693 | S | S1.Pco18205ORF9105P (100% identity) | S3.PcoORF5694P | |
| 5694 | M | M.ScoHDD04ORF10295P (100% identity) | M.PcoORF5694P | |
| 5695 | R | Pco18205ORF9105P (100% identity) | PcoORF5694P | |
| 5696 | 111 aa hypothetical protein | |||
| 4772 | 136 aa hypothetical protein | |||
| 4773 | M | M.Pco18205ORF6540P (100% identity) | M.PcoORF4773P | |
| 4774 | S | S.Pco18205ORF6540P (100% identity) | S.PcoORF4773P | |
| 4775 | R | Pco18205ORF6540P (100% identity) | PcoORF4773P | |
| 4776 | 42 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6198 | 174 aa hypothetical protein | |||
| 6199 | RM | Pco18205ORF8590P (100% identity) | GAACNNNNNNTCC | PcoI |
| 6200 | 275 aa hypothetical protein | |||
| 6736 | 54 aa hypothetical protein | |||
| ??? | M | M.Pco18205ORF9650P (100% identity) | M.PcoORF6737P | |
| 6739 | R | Pco18205ORF9650P (100% identity) | PcoORF6737P | |
| 6740 | 424 aa hypothetical protein | |||
| 4605 | helicase C-terminal domain protein | |||
| 4606 | M | M.Pco18205ORF7250P (100% identity) | M.PcoORFBP | |
| 4607 | R | 183 aa hypothetical protein | PcoORFBP | |
| 4608 | 822 aa hypothetical protein | |||
| 6848 | 47 aa hypothetical protein | |||
| 6849 | C | C.Pco18205ORF9180P (100% identity) | C.PcoORF6850P | |
| 6850 | M | M.Pco18205ORF9180P (100% identity) | M.PcoORF6850P | |
| 6851 | R | Pco18205ORF9180P (100% identity) | PcoORF6850P | |
| 6852 | transcriptional regulator, PvuIIC | |||
| 4315 | 126 aa hypothetical protein | |||
| 4316 | R | Pco18205ORF2330P (100% identity) | PcoORF4317P | |
| 4317 | M | M.Pco18205ORF2330P (100% identity) | M.PcoORF4317P | |
| 4318 | 45 aa hypothetical protein | |||
| 4607 | 183 aa hypothetical protein | |||
| 4608 | R | Pco18205ORF7250P (48% identity) | PcoORFCP | |
| 4609 | LlaJI restriction endonuclease | |||
| 6852 | transcriptional regulator, PvuIIC | |||
| 6853 | M | M2.Pca1573ORF4850P (100% identity) | M.PcoORF6853P | |
| 6854 | 195 aa hypothetical protein | |||
| 6611 | 146 aa hypothetical protein | |||
| 6612 | RM | Pco18205ORF5720P (100% identity) | PcoORF6612P | |
| 6613 | Eco57I restriction endonuclease | |||
| 6612 | 881 aa hypothetical protein | |||
| 6613 | M | M2.Pco18205ORF5720P (100% identity) | M1.PcoORF6613P | |
| 6614 | M | M1.Pco18205ORF5720P (97% identity) | M2.PcoORF6613P | |
| 6615 | Fic family protein | |||
| 6755 | 128 aa hypothetical protein | |||
| 6756 | R | Pco18205ORF9725P (100% identity) | PcoORF314P | |
| 6757 | 266 aa hypothetical protein | |||
| 4178 | 682 aa hypothetical protein | |||
| 4179 | RM | Pco18205ORF2935P (99% identity) | PcoORF4179P | |
| 4180 | 148 aa hypothetical protein | |||
| 4064 | 77 aa hypothetical protein | |||
| 4065 | R | Pco18205ORF3450P (100% identity) | PcoORF4066P | |
| 4066 | M | M2.Pco18205ORF3450P (100% identity) | M1.PcoORF4066P | |
| 4067 | M | M1.Pco18205ORF3450P (100% identity) | M2.PcoORF4066P | |
| 4068 | C | C.Pco18205ORF3450P (100% identity) | C.PcoORF4066P | |
| 4069 | 45 aa hypothetical protein | |||
| 4390 | DNA (cytosine-5-)-methyltransferase | |||
| 4391 | M | M.Pco18205ORF8200P (100% identity) | M.PcoORF4391P | |
| 4392 | 400 aa hypothetical protein | |||
| 4393 | 144 aa hypothetical protein | |||
| 4394 | R | Pco18205ORF8200P (100% identity) | PcoORF4391P | |
| 4395 | 46 aa hypothetical protein | |||
| 3779 | 111 aa hypothetical protein | |||
| 3780 | RM | Pco18205ORF4695P (100% identity) | PcoORF3780BP | |
| 3781 | RM | Fnu048ORFAAP (83% identity) | PcoORF3780AP | |
| 3782 | 344 aa hypothetical protein | |||
| 4761 | 135 aa hypothetical protein | |||
| 4762 | M | M.Pco18205ORF6590P (100% identity) | M.PcoORF4762P | |
| 4763 | R | Pco18205ORF6590P (100% identity) | PcoORF4762P | |
| 4764 | 422 aa hypothetical protein | |||
| 4012 | 80 aa hypothetical protein | |||
| ??? | M | M.Pco18205ORF3705P (81% identity) | M.PcoORFDP | |
| 4014 | 51 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3676 | SNF2 family N-terminal domain protein | |||
| 3677 | M | M.Pco18205ORF2020P (100% identity) | M.PcoORF3677P | |
| 3678 | R | Pco18205ORF2020P (100% identity) | PcoORF3677P | |
| 3679 | toxin-antitoxin system, antitoxin | |||
| 5620 | 71 aa hypothetical protein | |||
| 5621 | R | Pco18205ORF8795P (100% identity) | PcoORF5622P | |
| 5622 | M | M.Pco18205ORF8795P (97% identity) | M.PcoORF5622P | |
| 5623 | 62 aa hypothetical protein | |||
| 3883 | 83 aa hypothetical protein | |||
| 3884 | M | M.Pco18205ORF4280P (100% identity) | M.PcoORF3884P | |
| 3885 | R | Pco18205ORF4280P (100% identity) | PcoORF3884P | |
| 3886 | 588 aa hypothetical protein | |||
| 4370 | 393 aa hypothetical protein | |||
| 4371 | M | M.Pco18205ORF8295P (100% identity) | M.PcoORF4371P | |
| 4372 | R | Pco18205ORF8295P (100% identity) | PcoORF4371P | |
| 4374 | 63 aa hypothetical protein | |||
| 4389 | 275 aa hypothetical protein | |||
| 4390 | M | M.Pco18205ORF8205P (100% identity) | M.PcoORF4390P | |
| 4391 | 435 aa hypothetical protein | |||
| 4720 | helicase C-terminal domain protein | |||
| 4721 | R | Pco18205ORF6775P (100% identity) | PcoORF4722P | |
| 4722 | M | M.Pco18205ORF6775P (100% identity) | M.PcoORF4722P | |
| 4723 | 44 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3772 | 157 aa hypothetical protein | |||
| 3773 | R | Pco18205McrC3P (100% identity) | PcoMcrCP | |
| 3774 | R | Pco18205McrB3P (100% identity) | PcoMcrBP | |
| 4475 | 434 aa hypothetical protein | |||
| 4476 | R | Pco18205McrCP (100% identity) | PcoMcrC2P | |
| 4477 | R | Pco18205McrBP (100% identity) | PcoMcrB2P | |
| 4478 | 77 aa hypothetical protein | |||
| 4779 | 89 aa hypothetical protein | |||
| 4780 | R | Pco18205McrC2P (100% identity) | PcoMcrC3P | |
| 4781 | R | Pco18205McrB2P (100% identity) | PcoMcrB3P | |
| 4782 | 44 aa hypothetical protein | |||