Photobacterium profundum 3TCK |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Photobacterium profundum 3TCK RM systems
Ref: Bartlett,D.H. et al. unpublished
REBASE ref # 11526
Contig set: 6,107,610 bp
GenBank #: AAPH00000000 (NZ_AAPH00000000)
REBASE acronym: PprTCK
Org_num: 5799
All begin P3TCK_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11018 | Tn554-related, transposase C | |||
| 11023 | R | VcrJ55ORF1330002P (92% identity) | PprTCKORF11038P | |
| 11028 | 399 aa hypothetical protein | |||
| 11033 | S | S.Sal18064ORF8000P (48% identity) | S.PprTCKORF11038P | |
| 11038 | M | M.Vcr106ORF19665P (96% identity) | M.PprTCKORF11038P | |
| 11043 | site-specific recombinase, phage integrase | |||
| 5241 | 685 aa hypothetical protein | |||
| 5246 | R | PspJ15ORFBP (89% identity) | PprTCKORF5251P | |
| 5251 | M | M.Eco9024II (71% identity) | M.PprTCKORF5251P | |
| 5256 | S | S.CagYM01ORFEP (39% identity) | S.PprTCKORF5251P | |
| 5261 | GTPase subunit of restriction endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5256 | type I restriction-modification system, S | |||
| 5261 | R | Pda2008McrBP (34% identity) | PprTCKMcrBP | |
| 5266 | R | Awo160McrC2P (63% identity) | PprTCKMcrCP | |
| 5271 | 111 aa hypothetical protein | |||