Rhodococcus species AW25M09 |
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Putative Rhodococcus species AW25M09 RM systems
Ref: Hjerde,E. et al. unpublished
REBASE ref # 15795
Contig set: 5,642,031 bp
GenBank #: CAPS00000000 (NZ_CAPS00000000)
REBASE acronym: RspM09
Org_num: 10431
All begin RHODMAR_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5102 | M | M.Mfo6368ORF3914P (84% identity) | M.RspM09ORF5102P | |
| 5103 | S | S.Asp607ORF20930P (22% identity) | S.RspM09ORF5102P | |
| 6 | uncharacterized protein | |||
| 7 | R | Mfo6368ORF3914P (89% identity) | RspM09ORF7P | |
| 8 | endo-1,4-beta-xylanase | |||
| 4722 | methyltransferase | |||
| 4723 | M | M.Rpy5ApORF26950P (87% identity) | M.RspM09ORF4723P | |
| 4724 | S | S.Mma90ORF24005P (52% identity) | S.RspM09ORF4723P | |
| 4725 | R | Rru4ORFHP (88% identity) | RspM09ORF4723P | |
| 4726 | Shikimate kinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 968 | R | RfaD188ORF1965P (51% identity) | GGCGCC | RspM09ORF969P |
| 969 | M | M.RfaA25fORF1585P (92% identity) | GGCGCC | M.RspM09ORF969P |
| 970 | copper resistance protein | |||
| 4863 | uncharacterized protein | |||
| 4864 | M | M.RfaD188ORF173P (94% identity) | M.RspM09ORF4864P | |
| 4865 | uncharacterized protein | |||
| 1191 | uncharacterized protein | |||
| 1192 | V | V.RspPBTS2ORF1114P (87% identity) | V.RspM09ORF1193P | |
| 1193 | M | M.RfaA21d2ORF345P (94% identity) | M.RspM09ORF1193P | |
| 1194 | ABC transporter ATPase/permease | |||
| 2336 | ArsR family transcriptional regulator | |||
| 2337 | M | M.RfaA25fORF9470P (86% identity) | TTCGAA | M.RspM09ORF2337P |
| 2338 | uncharacterized protein | |||
| 4898 | uncharacterized protein | |||
| 4899 | RM | RkyKB10ORF21425P (98% identity) | RspM09ORF4899P | |
| 4900 | uncharacterized protein | |||
| ??? | DNA mismatch endonuclease Vsr | |||
| 3504 | M | M.Gpo135ORF15835P (54% identity) | M.RspM09ORF3504P | |
| 5071 | uncharacterized protein | |||
| 5072 | RM | RfaA21d2ORF7240P (84% identity) | RspM09ORF5072P | |
| 5073 | uncharacterized protein | |||
| 4155 | HNH endonuclease | |||
| 4156 | M | M.FspT48ORF10490P (56% identity) | GAATTC | M.RspM09ORF4156P |
| 4157 | Ppx/GppA family phosphatase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2253 | uncharacterized protein | |||
| 2254 | M | M.RfaGS01ORF8745P (67% identity) | M.RspM09ORF2254P | |
| 2255 | R | RfaGS01ORF8745P (82% identity) | RspM09ORF2254P | |
| 2256 | uncharacterized protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4145 | helicase | |||
| 4146 | R | Rsp94MrrP (63% identity) | RspM09MrrP | |
| 4147 | uncharacterized protein | |||