Escherichia coli TW10119 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli TW10119 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,551,996 bp
GenBank #: AKMA00000000 (NZ_AKMA00000000)
REBASE acronym: Eco10119
Org_num: 10409
All begin ECTW10119_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 323 | endoribonuclease symE | |||
| 324 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco10119ORF325P |
| 325 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco10119ORF325P |
| 326 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco10119ORF325P |
| 327 | 87 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3786 | 41 aa hypothetical protein | |||
| 3787 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco10119ORF3787P | |
| 3788 | 73 aa hypothetical protein | |||
| 3833 | prophage repressor CI | |||
| 3834 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco10119ORF3834P |
| 3835 | R | Sso1099IP (100% identity) | CTGCAG | Eco10119ORF3834P |
| 3836 | phage regulatory protein, Rha family | |||
| 3258 | anti-termination protein | |||
| 3259 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco10119ORF3259P |
| 3260 | ninB protein | |||
| 3851 | regulatory protein | |||
| 3852 | M | M.Esp10290ORF1290P (100% identity) | GATC | M.Eco10119ORF3852P |
| 3853 | 70 aa hypothetical protein | |||
| 5868 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco10119ORFBP | |
| 5871 | 109 aa hypothetical protein | |||
| 5012 | ribulose-phosphate 3-epimerase | |||
| 5013 | M | DNA adenine methylase | GATC | M.Eco10119DamP |
| 5014 | protein damX | |||
| 2335 | 65 aa hypothetical protein | |||
| 2336 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco10119ORF2336P | |
| 2339 | 455 aa hypothetical protein | |||
| 273 | ATP-dependent helicase | |||
| 274 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco10119ORF274P |
| 4908 | DNA-binding protein fis | |||
| 4909 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco10119ORF4909P |
| 4910 | 37 aa hypothetical protein | |||
| 3096 | 306 aa hypothetical protein | |||
| 3097 | V | V.EcosPA8DcmP (100% identity) | V.Eco10119DcmP | |
| 3098 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco10119DcmP |
| 3099 | 231 aa hypothetical protein | |||