Escherichia coli PA5 |
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Putative Escherichia coli PA5 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,350,185 bp
GenBank #: AKLD00000000 (NZ_AKLD00000000)
REBASE acronym: EcoPA5
Org_num: 10403
All begin ECPA5_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5603 | endoribonuclease symE | |||
| ??? | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoPA5ORF5605P |
| 5605 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoPA5ORF5605P |
| 5606 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoPA5ORF5605P |
| 5607 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2943 | M | phage N-6-adenine-methyltransferase | GATC | M.EcoPA5ORF2943P |
| ??? | RM | Eo5534ORFAP (39% identity) | EcoPA5ORF5553P | |
| 1837 | lipoprotein | |||
| 1838 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoPA5ORF1838P | |
| 1841 | 41 aa hypothetical protein | |||
| 5692 | 41 aa hypothetical protein | |||
| 5693 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoPA5ORF5693P | |
| 5694 | 73 aa hypothetical protein | |||
| 2794 | 306 aa hypothetical protein | |||
| 2795 | V | V.EcosPA8DcmP (100% identity) | V.EcoPA5DcmP | |
| 2796 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoPA5DcmP |
| 2797 | 231 aa hypothetical protein | |||
| 5552 | ATP-dependent helicase | |||
| 5553 | RM | Eo5534ORFAP (39% identity) | EcoPA5ORF5553P | |
| 2057 | 40 aa hypothetical protein | |||
| 2058 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoPA5ORF2058P | |
| 2059 | phage domain protein | |||
| 4486 | ribulose-phosphate 3-epimerase | |||
| 4487 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPA5DamP |
| 4488 | protein damX | |||
| 4382 | DNA-binding protein fis | |||
| 4383 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoPA5ORF4383P |
| 4384 | 37 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3409 | M | phage N-6-adenine-methyltransferase | GATC | M.EcoPA5ORF3409P |