Escherichia coli EC4422 |
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Putative Escherichia coli EC4422 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,315,687 bp
GenBank #: AKMG00000000 (NZ_AKMG00000000)
REBASE acronym: Eco4422
Org_num: 10410
All begin ECEC4422_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 67 | endoribonuclease symE | |||
| 68 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco4422ORF69P |
| 69 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco4422ORF69P |
| 70 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco4422ORF69P |
| 71 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3023 | 225 aa hypothetical protein | |||
| 3024 | M | M.SflWW1ORF7070P (93% identity) | GATC | M.Eco4422ORF3024P |
| 2027 | 65 aa hypothetical protein | |||
| 2028 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco4422ORF2028P | |
| 2031 | 39 aa hypothetical protein | |||
| 3364 | ninF | |||
| 3365 | M | M.Eph2851ORFAP (93% identity) | GATC | M.Eco4422ORF3365P |
| 5610 | 41 aa hypothetical protein | |||
| 5611 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco4422ORF5611P | |
| 5612 | 73 aa hypothetical protein | |||
| 17 | ATP-dependent helicase | |||
| 18 | RM | EcoOS292II (100% identity) | Eco4422ORF18P | |
| 4560 | ribulose-phosphate 3-epimerase | |||
| 4561 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4422DamP |
| 4562 | protein damX | |||
| 2922 | 306 aa hypothetical protein | |||
| ??? | V | V.EcosPA8DcmP (100% identity) | V.Eco4422DcmP | |
| 2924 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco4422DcmP |
| 2925 | 231 aa hypothetical protein | |||
| 4456 | DNA-binding protein fis | |||
| 4457 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco4422ORF4457P |
| 4458 | 59 aa hypothetical protein | |||