Escherichia coli EC4402 |
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Putative Escherichia coli EC4402 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,446,996 bp
GenBank #: AKMI00000000 (NZ_AKMI00000000)
REBASE acronym: Eco4402
Org_num: 10448
All begin ECEC4402_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5709 | endoribonuclease symE | |||
| 5710 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco4402ORF5711P |
| 5711 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco4402ORF5711P |
| 5712 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco4402ORF5711P |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2919 | M | M.SflN97ORF15810P (94% identity) | GATC | M.Eco4402ORF2919P |
| 2920 | ninB protein | |||
| 3457 | M | phage N-6-adenine-methyltransferase | GATC | M.Eco4402ORF3457P |
| 3458 | 39 aa hypothetical protein | |||
| 5862 | 41 aa hypothetical protein | |||
| 5863 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco4402ORF5863P | |
| 5864 | 73 aa hypothetical protein | |||
| 1878 | 65 aa hypothetical protein | |||
| 1879 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco4402ORF1879P | |
| 1882 | 52 aa hypothetical protein | |||
| 5968 | yfcA protein | |||
| 5969 | M | DNA methylase | M.Eco4402ORF5969P | |
| 5970 | 3 aa hypothetical protein | |||
| 5388 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco4402ORF5387P | |
| 5391 | 116 aa hypothetical protein | |||
| 3490 | 55 aa hypothetical protein | |||
| 3491 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco4402ORF3491P |
| 3492 | 70 aa hypothetical protein | |||
| 5657 | ATP-dependent helicase | |||
| 5658 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco4402ORF5658P |
| 2787 | 306 aa hypothetical protein | |||
| 2788 | V | V.EcosPA8DcmP (100% identity) | V.Eco4402DcmP | |
| 2789 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco4402DcmP |
| 2790 | 231 aa hypothetical protein | |||
| 4569 | ribulose-phosphate 3-epimerase | |||
| 4570 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4402DamP |
| 4571 | protein damX | |||
| 4462 | DNA-binding protein fis | |||
| 4463 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco4402ORF4463P |
| 4464 | 37 aa hypothetical protein | |||