Bibersteinia trehalosi USDA-ARS-USMARC-192 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bibersteinia trehalosi USDA-ARS-USMARC-192 RM systems
Ref: Harhay,G.P. et al. unpublished
REBASE ref # 15753
Complete sequence: 2,407,846 bp
GenBank #: CP003745
REBASE acronym: Btr192
Org_num: 8442
All begin WQG_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11880 | Bifunctional protein GlmU | |||
| 11890 | M | type I restriction enzyme HindVIIP M protein | TAAANNNNNNTGT | M.Btr192ORF11890P |
| 11900 | S | S.Btr189ORF11560P (100% identity) | TAAANNNNNNTGT | S.Btr192ORF11890P |
| 11910 | 213 aa hypothetical protein | |||
| 11920 | 169 aa hypothetical protein | |||
| 11930 | R | Btr188IIIP (100% identity) | TAAANNNNNNTGT | Btr192ORF11890P |
| 11940 | Asparaginyl-tRNA synthetase | |||
| 21360 | AraC family transcriptional regulator | |||
| ??? | M | M.Btr189I (100% identity) | ACGNNNNNNCGT | M.Btr192III |
| 21380 | 37 aa hypothetical protein | |||
| 21390 | Filamentation induced by cAMP protein Fic | |||
| 21400 | S | S.Btr189I (100% identity) | ACGNNNNNNCGT | S.Btr192III |
| 21410 | transcriptional regulator | |||
| 21420 | R | Btr189IP (100% identity) | ACGNNNNNNCGT | Btr192IIIP |
| 21430 | Beta-lactamase fold protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17540 | Enoyl-CoA hydratase/carnithine racemase-like | |||
| 17550 | M | M.Btr189ORF5700P (98% identity) | A | M.Btr192IV |
| 17560 | Glycerol uptake facilitator protein | |||
| 18020 | DNA polymerase IV | |||
| 18030 | M | M.Btr189II (100% identity) | GATC | M.Btr192I |
| 18040 | 3-dehydroquinate synthase | |||
| 20760 | 1,4-dihydroxy-2-naphthoate synthase | |||
| ??? | RM | Btr188ORF1790P (99% identity) | Btr192ORF20770P | |
| 20800 | FRG domain protein | |||
| 20820 | 56 aa hypothetical protein | |||
| 20830 | RM | Btr189ORF2420P (16% identity) | Btr192ORF20830P | |
| 20840 | Peptidyl-prolyl cis-trans isomerase | |||
| 21770 | 38 aa hypothetical protein | |||
| 21780 | M | M.Btr189ORF850P (100% identity) | CCWGG | M.Btr192V |
| 21790 | 722 aa hypothetical protein | |||
| 21780 | Cytosine-specific methyltransferase | |||
| 21790 | R | Btr189ORF850P (100% identity) | Btr192ORF21780P | |
| 21800 | 360 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11500 | esterase/lipase | |||
| 11510 | R | Btr189ORF11930P (100% identity) | ACATC | Btr192II |
| 11520 | M | M.Btr189ORF11930P (100% identity) | ACATC | M.Btr192II |
| 11530 | 57 aa hypothetical protein | |||