Rhodanobacter denitrificans 2APBS1 |
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Putative Rhodanobacter denitrificans 2APBS1 RM systems
Ref: Huntemann,M. et al. unpublished
REBASE ref # 15743
Complete sequence: 4,225,490 bp
GenBank #: CP003470
REBASE acronym: RdeR2
Org_num: 9229
All begin R2APBS1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1571 | 332 aa hypothetical protein | |||
| 1572 | M | M.RdePBS1ORF5950P (100% identity) | M.RdeR2ORF1482P | |
| 1573 | S | S.RdePBS1ORF5950P (100% identity) | S.RdeR2ORF1482P | |
| 1574 | 203 aa hypothetical protein | |||
| 1575 | R | RdePBS1ORF5950P (87% identity) | RdeR2ORF1482P | |
| 1576 | 164 aa hypothetical protein | |||
| 2402 | metal-dependent enzyme of the | |||
| 2404 | R | RdePBS1ORF8875P (100% identity) | RdeR2ORF3363P | |
| 2405 | M | M.RdePBS1ORF8875P (100% identity) | M.RdeR2ORF3363P | |
| 2406 | S | S.RdePBS1ORF8875P (100% identity) | S.RdeR2ORF3363P | |
| 2407 | 494 aa hypothetical protein | |||
| 3618 | glycerophosphodiester phosphodiesterase family protein, partial | |||
| 3619 | R | RdeR2ORF3623P (100% identity) | RdeR2ORF3539P | |
| 3620 | addiction module antidote protein, HigA family | |||
| 3621 | plasmid maintenance system killer protein | |||
| 3622 | restriction endonuclease S subunit | |||
| ??? | M | M.Rsp24678ORF13313P (100% identity) | M.RdeR2ORF3539P | |
| 3625 | glycyl aminopeptidase | |||
| 3618 | glycerophosphodiester phosphodiesterase family protein, partial | |||
| 3619 | R | RdeR2ORF3539P (100% identity) | RdeR2ORF3623P | |
| 3620 | addiction module antidote protein, HigA family | |||
| 3621 | plasmid maintenance system killer protein | |||
| 3622 | S | S.RdePBS1ORF14930P (100% identity) | S.RdeR2ORF3623P | |
| 3623 | M | M.RdeR5ORF16255P (98% identity) | M.RdeR2ORF3623P | |
| 3625 | glycyl aminopeptidase | |||
| 3876 | transcriptional regulator | |||
| 3877 | M | M.Rsp24678ORF17005P (100% identity) | M.RdeR2ORF856P | |
| 3878 | S | S.RdeR3ORF17580P (100% identity) | S.RdeR2ORF856P | |
| 3879 | 464 aa hypothetical protein | |||
| 3886 | Zn peptidase | |||
| 3887 | R | Rsp24678ORF17055P (100% identity) | RdeR2ORF846P | |
| 3888 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 418 | phosphatase, C-terminal domain of | |||
| 419 | R | RdePBS1ORF160P (100% identity) | GCNGC | RdeR2I |
| 420 | 282 aa hypothetical protein | |||
| 422 | histidine kinase | |||
| 423 | M | M.RdePBS1ORF180P (100% identity) | M.RdeR2ORF423P | |
| 424 | V | V.RdePBS1ORF180P (92% identity) | V.RdeR2ORF423P | |
| 425 | Restriction endonuclease | |||
| 1957 | 282 aa hypothetical protein | |||
| 1958 | M | M.RdeR5ORF18555P (100% identity) | RGATCY | M.RdeR2ORF2643P |
| 1959 | 298 aa hypothetical protein | |||
| 2197 | glycosyl transferase | |||
| 2198 | M | M.RdePBS1ORF7850P (100% identity) | CTCGAG | M.RdeR2ORF2481P |
| 2199 | 261 aa hypothetical protein | |||
| 2198 | Eco57I restriction endonuclease | |||
| 2199 | R | RdeR5ORF9560P (100% identity) | CTCGAG | RdeR2ORF2199P |
| 2200 | permease, DMT superfamily | |||
| 2343 | 170 aa hypothetical protein | |||
| 2344 | M | M.RdeR5ORF10390P (92% identity) | M.RdeR2ORF2349P | |
| 2345 | 556 aa hypothetical protein | |||
| 2865 | 109 aa hypothetical protein | |||
| 2866 | M | M.RdePBS1ORF11160P (100% identity) | M.RdeR2ORF1613P | |
| 2867 | 56 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 637 | amino acid transporter | |||
| 638 | R | RdePBS1ORF1265P (100% identity) | RdeR2ORF242P | |
| 639 | plasmid maintenance system killer protein | |||
| 640 | addiction module antidote protein, HigA family | |||
| 641 | M | M.Rsp24678ORF8833P (99% identity) | M.RdeR2ORF242P | |
| 642 | 142 aa hypothetical protein | |||
| 1118 | nuclease-like protein | |||
| 1119 | R | RdePBS1ORF3675P (100% identity) | RdeR2ORF1038P | |
| 1120 | M | M.Rsp24678ORF7981P (96% identity) | M.RdeR2ORF1038P | |
| 1121 | amidophosphoribosyltransferase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1570 | 210 aa hypothetical protein | |||
| 1571 | R | Mth10409MrrP (57% identity) | RdeR2MrrP | |
| 1572 | type I restriction-modification system | |||
| 2651 | 3-deoxy-D-arabinoheptulosonate-7-phosphate | |||
| 2653 | R | Rsp24678MrrP (100% identity) | RdeR2Mrr2P | |
| 2654 | 243 aa hypothetical protein | |||