Arthrospira platensis C1 |
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Putative Arthrospira platensis C1 RM systems
Ref: Cheevadhanarak,S. et al. Stand Genomic Sci 6 (1), 43-53 (2012)
REBASE ref # 14449
Contig set: 5,934,248 bp
GenBank #: AFXD00000000 (NZ_AFXD00000000)
REBASE acronym: AplC1
Org_num: 10227
All begin SPLC1_S
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 260030 | 89 aa hypothetical protein | |||
| 260040 | M | M.Asp92ORFI1P (100% identity) | M.AplC1ORF260040P | |
| 260050 | 351 aa hypothetical protein | |||
| 260070 | S | S2.Lfu8579ORF3950P (54% identity) | S.AplC1ORF260040P | |
| 260080 | 36 aa hypothetical protein | |||
| 260090 | 102 aa hypothetical protein | |||
| 260100 | R | AplC1ORF1498P (100% identity) | AplC1ORF260040P | |
| 260110 | 96 aa hypothetical protein | |||
| 540070 | 79 aa hypothetical protein | |||
| 540080 | R | AplC1ORF3590P (100% identity) | AplC1ORF540080P | |
| 540090 | 34 aa hypothetical protein | |||
| 540100 | 69 aa hypothetical protein | |||
| 540110 | 110 aa hypothetical protein | |||
| 540120 | S | S.AplC1ORF3590P (100% identity) | S.AplC1ORF540080P | |
| 540130 | PilT protein domain protein | |||
| 540210 | 83 aa hypothetical protein | |||
| 540220 | M | M.AplC1ORF3590P (100% identity) | M.AplC1ORF540220P | |
| 540230 | 123 aa hypothetical protein | |||
| 50960 | 8-oxoguanine DNA glycosylase | |||
| 50970 | R | LinBM01ORF5200P (100% identity) | AplC1ORF51010P | |
| 50980 | 65 aa hypothetical protein | |||
| 50990 | 74 aa hypothetical protein | |||
| 51000 | nitrate ABC transporter inner membrane subunit | |||
| 51010 | M | M.LinBM01ORF5200P (99% identity) | M.AplC1ORF51010P | |
| 51020 | 101 aa hypothetical protein | |||
| 51030 | 80 aa hypothetical protein | |||
| 51040 | 157 aa hypothetical protein | |||
| 51050 | PIN domain protein putative | |||
| 51060 | 41 aa hypothetical protein | |||
| 51070 | S | S.Asp92ORFZP (62% identity) | S.AplC1ORF51010P | |
| 51080 | 37 aa hypothetical protein | |||
| 41450 | hypothetical protein | |||
| 41460 | S | S2.Lfu8579ORF3950P (100% identity) | S.AplC1ORF41460P | |
| 41470 | hypothetical protein | |||
| 531840 | 242 aa hypothetical protein | |||
| ??? | R | AplDDORFCP (100% identity) | AplC1ORF531840P | |
| 531890 | 37 aa hypothetical protein | |||
| 203800 | anthranilate phosphoribosyltransferase | |||
| 203810 | R | AplC1ORF658P (100% identity) | AplC1ORF203850P | |
| 203820 | 239 aa hypothetical protein | |||
| 203830 | SMC domain protein | |||
| 203840 | S | S.AplC1ORF658P (100% identity) | S.AplC1ORF203850P | |
| 203850 | M | M.LfuKN01ORF26025P (99% identity) | M.AplC1ORF203850P | |
| 203860 | peptidase S1 and S6 chymotrypsin/Hap | |||
| 204120 | chromosomal replication initiator protein DnaA | |||
| 204130 | R | AmaCSORF788P (99% identity) | AplC1ORF204170P | |
| 204140 | S | S.AmeWSORF2351P (34% identity) | S.AplC1ORF204170P | |
| 204150 | 79 aa hypothetical protein | |||
| 204160 | 72 aa hypothetical protein | |||
| 204170 | M | M.LfuKN01ORF26170P (99% identity) | M.AplC1ORF204170P | |
| 204180 | 51 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 80050 | 670 aa hypothetical protein | |||
| 80060 | R | AplC1ORF5615P (100% identity) | GCTAGC | AplC1ORF80070P |
| 80070 | M | M.LfuKN01ORF19175P (100% identity) | GCTAGC | M.AplC1ORF80070P |
| 80080 | UbiA prenyltransferase | |||
| 380160 | phosphoesterase RecJ-like protein | |||
| 380170 | C | C.LfuKN01ORF6475P (100% identity) | C.AplC1ORFAP | |
| ??? | R | LfuKN01ORF6475P (100% identity) | TACGTA | AplC1ORFAP |
| ??? | M | M.LfuKN01ORF6475P (100% identity) | TACGTA | M.AplC1ORFAP |
| 380210 | sun protein | |||
| 630130 | beta-18 Phycobilisome core subunit | |||
| 630140 | M | M.Asp8005ORF12130P (99% identity) | CGATCG | M.AplC1ORF630140P |
| 630150 | hemolysin A | |||
| 370160 | 41 aa hypothetical protein | |||
| ??? | M | M.Asp92ORFF1P (99% identity) | GACNNNGTC | M.AplC1ORF370170P |
| 370190 | R | LfuKN01ORF5980P (100% identity) | GACNNNGTC | AplC1ORF370170P |
| 370200 | C | C.LfuKN01ORF5980P (100% identity) | C.AplC1ORF370170P | |
| 370210 | 51 aa hypothetical protein | |||
| 50260 | NB-ARC domain protein | |||
| 50270 | R | Asp92ORFPP (100% identity) | AplC1ORF50280P | |
| 50280 | M | M.LfuKN01ORF24245P (100% identity) | M.AplC1ORF50280P | |
| 50290 | WD-40 repeat protein | |||
| 510300 | 72 aa hypothetical protein | |||
| 510310 | RM | AmaCSORF1559P (90% identity) | AplC1ORF510310P | |
| 510320 | 290 aa hypothetical protein | |||
| 500390 | TPR repeat protein | |||
| 500400 | M | M.Asp92ORFIP (100% identity) | M.AplC1ORF500400P | |
| 500410 | 219 aa hypothetical protein | |||
| 50830 | integron integrase | |||
| 50840 | M | M.Lfu8579ORF21805P (100% identity) | CGTACG | M.AplC1ORF50840P |
| ??? | R | Asp92ORFYP (100% identity) | CGTACG | AplC1ORF50840P |
| 50860 | 52 aa hypothetical protein | |||
| 370450 | 3-isopropylmalate dehydrogenase | |||
| 370460 | M | M.AplC1ORF2185P (100% identity) | TCTAGA | M.AplC1ORF370460P |
| 370470 | 83 aa hypothetical protein | |||
| 260640 | bifunctional | |||
| 260650 | R | LfuKN01ORF3670P (100% identity) | CATATG | AplC1ORF260660P |
| 260660 | M | M.Lfu8579ORF4165P (97% identity) | CATATG | M.AplC1ORF260660P |
| 260670 | 326 aa hypothetical protein | |||
| 200580 | DNA repair protein RecO | |||
| 200590 | R | LfuKN01ORF24650P (100% identity) | GRCGYC | AplC1ORF200600P |
| 200600 | M | M.AmaCSORF5018P (100% identity) | GRCGYC | M.AplC1ORF200600P |
| 200610 | anti-sigma regulatory factor | |||
| 500880 | ADP-ribosylation/Crystallin J1 | |||
| 500890 | M | M.LinBM01ORF15660P (100% identity) | TCTAGA | M.AplC1ORF500890P |
| 500900 | succinate dehydrogenase and fumarate reductase | |||
| 10960 | beta-ketoacyl synthase | |||
| 10970 | M | M.LinBM01ORF8860P (100% identity) | GCSGC | M.AplC1ORF10970P |
| 10990 | membrane-associated zinc metalloprotease | |||
| 550970 | glutathione S-transferase domain protein | |||
| 550980 | M | M.LinBM01ORF10715P (100% identity) | GGTNACC | M.AplC1ORF550980P |
| 550990 | R | LinBM01ORF10715P (100% identity) | GGTNACC | AplC1ORF550980P |
| 551000 | transposase | |||
| 361070 | 137 aa hypothetical protein | |||
| 361080 | M | M.AplC1ORF2110BP (59% identity) | M.AplC1ORF361080P | |
| 361090 | filamentous hemagglutinin | |||
| 271100 | NmrA-like protein | |||
| 271110 | M | M.LfuKN01ORF3340P (100% identity) | CAGCTG | M.AplC1ORF271110P |
| ??? | C | C.Lfu8579ORF4815P (100% identity) | C.AplC1ORF271110P | |
| 271130 | R | LfuKN01ORF3340P (100% identity) | CAGCTG | AplC1ORF271110P |
| 271140 | 55 aa hypothetical protein | |||
| 541200 | S-(hydroxymethyl)glutathione dehydrogenase/class | |||
| 541210 | M | M.AmaCSORF2306P (100% identity) | GGWCC | M.AplC1ORF541210P |
| 541220 | xanthine/uracil/vitamin C permease | |||
| 101340 | aminotransferase class V | |||
| 101350 | M | M.SplZORFRP (85% identity) | ATGCAT | M.AplC1ORF101350P |
| ??? | R | SplZORFRP (100% identity) | ATGCAT | AplC1ORF101350P |
| 101380 | phosphoribosyltransferase | |||
| 61580 | 43 aa hypothetical protein | |||
| 61590 | RM | Psp001ORF27065P (85% identity) | TTCGAA | AplC1ORF61590P |
| 61600 | response regulator receiver protein | |||
| 411870 | cobalamin biosynthesis protein CobW | |||
| ??? | R | AmaCSORF4996P (100% identity) | GGYRCC | AplC1ORF411890P |
| 411890 | M | M.LfuKN01ORF7320P (100% identity) | GGYRCC | M.AplC1ORF411890P |
| 411900 | 290 aa hypothetical protein | |||
| 102580 | 352 aa hypothetical protein | |||
| 102590 | R | LinBM01ORF1220P (91% identity) | TTCGAA | AplC1ORF102600P |
| 102600 | M | M.LfuKN01ORF21740P (100% identity) | TTCGAA | M.AplC1ORF102600P |
| 102610 | 175 aa hypothetical protein | |||
| 203210 | transposase | |||
| ??? | RM | AplYZORF2575P (92% identity) | AplC1ORF599P | |
| 203240 | 35 aa hypothetical protein | |||
| 203210 | transposase | |||
| 203220 | RM | AplC1ORF599P (52% identity) | AplC1ORF203220AP | |
| 203230 | RM | AplC1ORF599P (47% identity) | AplC1ORF203220BP | |
| 203240 | 35 aa hypothetical protein | |||
| 205170 | CheC inhibitor of MCP methylation | |||
| 205180 | M | M.LinBM01ORF24775P (100% identity) | CYCGRG | M.AplC1ORF205180P |
| 205190 | R | LinBM01ORF24775P (100% identity) | CYCGRG | AplC1ORF205180P |
| 205200 | cytochrome c biogenesis protein transmembrane | |||
| 206640 | carbamoyl-phosphate synthase large subunit | |||
| ??? | M | M.LfuKN01ORF950P (100% identity) | RCATGY | M.AplC1ORF206650P |
| ??? | R | LfuKN01ORF950P (33% identity) | RCATGY | AplC1ORF206650P |
| 206670 | C | C.Asp92ORFCP (100% identity) | C.AplC1ORF206650P | |
| 206680 | 43 aa hypothetical protein | |||
| 208980 | 265 aa hypothetical protein | |||
| 208990 | M | M.Lfu8579ORF2325P (100% identity) | CTGCAG | M.AplC1ORF208990P |
| 209000 | UDP-N-acetylglucosamine 2-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 31990 | 38 aa hypothetical protein | |||
| 32000 | M | M.Asp92ORFA1P (85% identity) | M.AplC1ORF32000P | |
| 32010 | ATPase-like protein | |||
| 32020 | 47 aa hypothetical protein | |||
| 32030 | 143 aa hypothetical protein | |||
| 32040 | R | LinBM01ORF7435P (99% identity) | AplC1ORF32000P | |
| 32050 | glycosyl transferase group 1 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 370140 | alpha/beta hydrolase fold protein | |||
| 370150 | R | Asp8005MrrP (99% identity) | AplC1Mrr2P | |
| 370160 | 41 aa hypothetical protein | |||
| 270310 | 39 aa hypothetical protein | |||
| 270320 | R | SraDG5AMrrP (68% identity) | AplC1MrrP | |
| 270330 | seed calcium dependent protein kinase a | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 220190 | 145 aa hypothetical protein | |||
| 220200 | M | M.LfuKN01ORF2050P (100% identity) | GATC | M.AplC1ORF220200P |
| 220210 | 46 aa hypothetical protein | |||