Mycoplasma penetrans HF-2 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mycoplasma penetrans HF-2 RM systems
Ref: Sasaki,Y. et al. Nucleic Acids Res. 30 (23), 5293-5300 (2002)
REBASE ref # 7800
Complete sequence: 1,358,633 bp
GenBank #: BA000026 (NC_004432)
REBASE acronym: Mpe
Org_num: 3625
All begin MYPE
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8180 | integrase | |||
| 8190 | S | S1.Mar145ORF74P (33% identity) | S.MpeORF8210AP | |
| 8200 | S | S.MpeORF8210AP (25% identity) | S.MpeORF8210BP | |
| 8210 | M | M.Mar145ORF74P (70% identity) | M.MpeORF8210P | |
| ??? | R | Mar145ORF74P (58% identity) | MpeORF8210P | |
| 8250 | tRNA-(5-methylaminomethyl-2-thiouridylate) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1220 | GMP synthase | |||
| 1230 | M | M.Cje6476ORF7330P (39% identity) | GATC | M.MpeORF1230P |
| 1240 | transposase for IS1630-like insertion sequence | |||
| 1770 | 353 aa hypothetical protein | |||
| 1780 | M | M1.Pas20707ORF756P (33% identity) | CCATC | M1.MpeORF1780P |
| 1790 | M | M2.FnuSB14I (53% identity) | GATGG | M2.MpeORF1780P |
| 1800 | R | AspBS20ORF14785P (43% identity) | CCATC | MpeORF1780P |
| 1810 | 300 aa conserved hypothetical protein | |||
| 5570 | glutamine transport ATP-binding protein | |||
| 5580 | RM | 829 aa conserved hypothetical protein | MpeORF5580P | |
| 5590 | 515 aa conserved hypothetical protein | |||
| 5580 | 829 aa conserved hypothetical protein | |||
| 5590 | RM | M2.TspB3ORF9915P (42% identity) | MpeORF5600P | |
| 5600 | predicted methylase | |||
| 9780 | transposase for IS1630-like insertion sequence | |||
| 9790 | R | 368 aa hypothetical protein | MpeORF9800P | |
| 9800 | cytosine-specific DNA methylase | |||
| 9790 | 368 aa hypothetical protein | |||
| 9800 | M | M.SphP40ORF1568P (75% identity) | RGCY | M.MpeII |
| 9810 | 312 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4765 | 78 aa hypothetical protein | |||
| ??? | M | M.Mmy2806ORF3290P (36% identity) | M.MpeORF4770P | |
| 4790 | 290 aa hypothetical ATP/GTP-binding protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4930 | 437 aa conserved hypothetical protein | |||
| 4940 | M | M.MnaMs03ORF3180P (42% identity) | CG | M.MpeI |
| 4950 | haloacid dehalogenase-like hydrolase | |||