Klebsiella oxytoca M5al |
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Putative Klebsiella oxytoca M5al RM systems
Ref: Bao,G. et al. Genome Announc (2013) In press
REBASE ref # 15560
Contig set: 5,844,702 bp
GenBank #: AMPJ00000000 (NZ_AMPJ00000000)
REBASE acronym: KoxM5a1
Org_num: 10187
All begin KOXM_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18937 | ABC transporter ATP-binding protein | |||
| 18942 | R | KspM5a1ORF3680P (100% identity) | GGCANNNNNNTTC | KoxM5a1ORF18932P |
| 18947 | S | S.KspM5a1ORF3680P (100% identity) | GGCANNNNNNTTC | S.KoxM5a1ORF18932P |
| 18952 | M | M.KmiM4a1ORF4810P (100% identity) | GGCANNNNNNTTC | M.KoxM5a1ORF18932P |
| 18957 | restriction endonuclease | |||
| 4771 | 92 aa hypothetical protein | |||
| 4776 | S | S.KspM5a1ORF3365P (100% identity) | S.KoxM5a1ORF4781P | |
| ??? | M | M.Rpl9179ORF5094P (65% identity) | M.KoxM5a1ORF4781P | |
| 4786 | 131 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 496 | ribulose-phosphate 3-epimerase | |||
| 501 | M | M.PmeBin334DamP (100% identity) | GATC | M.KoxM5a1DamP |
| 506 | cell division protein DamX | |||
| 15308 | hydrolase | |||
| ??? | M | DNA-cytosine methyltransferase | CCWGG | M.KoxM5a1DcmP |
| ??? | DNA-cytosine methyltransferase | |||
| ??? | DNA-cytosine methyltransferase | |||
| ??? | M | DNA-cytosine methyltransferase | CCWGG | M.KoxM5a1Dcm2P |
| 15323 | V | V.PmeBin334DcmP (100% identity) | V.KoxM5a1Dcm2P | |
| 15328 | DMT superfamily transporter inner membrane | |||
| 12229 | 73 aa hypothetical protein | |||
| 12234 | M | M.KspM5a1ORF15860P (100% identity) | GATC | M.KoxM5a1ORF12234P |
| 12239 | 75 aa hypothetical protein | |||
| 28555 | 217 aa hypothetical protein | |||
| 28560 | M | M.KspM5a1ORF12135P (100% identity) | M.KoxM5a1ORF28560P | |
| 28565 | 85 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18952 | Type I restriction-modification system | |||
| 18957 | R | KspM5a1MrrP (100% identity) | KoxM5a1MrrP | |
| 18962 | transcriptional regulator, GntR | |||