Salmonella enterica subsp. enterica serovar Javiana CFSAN001992 |
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Putative Salmonella enterica subsp. enterica serovar Javiana CFSAN001992 RM systems
Ref: Timme,R.E. et al. unpublished
REBASE ref # 15783
Complete sequence: 4,634,161 bp
GenBank #: CP004027
REBASE acronym: SenJ
Org_num: 9719
All begin CFSAN001992_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11485 | 113 aa hypothetical protein | |||
| 11490 | M | M1.SenSmo02ORF2465P (99% identity) | GNNTAYNNNNNRTGG | M.SenJII |
| 11495 | S | S1.SenSmo02ORF2465P (98% identity) | GNNTAYNNNNNRTGG | S.SenJII |
| 11500 | 477 aa hypothetical protein | |||
| 11505 | 677 aa hypothetical protein | |||
| 11510 | R | SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | SenJIIP |
| 11515 | 237 aa hypothetical protein | |||
| 11515 | 237 aa hypothetical protein | |||
| 11520 | M | M.SenSmo02ORF2495P (100% identity) | M.SenJORF11520P | |
| 11525 | S | S.SenSmo02ORF2495P (100% identity) | S.SenJORF11520P | |
| 11530 | 62 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1495 | hydrolase | |||
| 1500 | M | M.Ssp918DcmP (100% identity) | CCWGG | M.SenJDcmP |
| 1505 | V | V.StyUK1DcmP (100% identity) | V.SenJDcmP | |
| 1510 | DMT superfamily transporter inner membrane | |||
| 6410 | methyltransferase | |||
| ??? | M | M.SenK1655ORFIP (98% identity) | GATC | M.SenJORF6415P |
| 6420 | 82 aa hypothetical protein | |||
| 11465 | 238 aa hypothetical protein | |||
| 11470 | R | Sen6269ORF19600P (100% identity) | SenJORF11470P | |
| 11475 | restriction endonuclease | |||
| 16155 | cell division protein DamX | |||
| 16160 | M | M.StyTDamP (100% identity) | GATC | M.SenJDamP |
| 16165 | ribulose-phosphate 3-epimerase | |||
| 16615 | 54 aa hypothetical protein | |||
| 16620 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenJIII |
| 16625 | global DNA-binding transcriptional dual | |||
| 19785 | bacteriophage protein | |||
| 19790 | M | M.SenS224ORF5510P (100% identity) | GATC | M.SenJORF19790P |
| 19795 | bacteriophage replication protein A | |||
| 20470 | bacteriophage protein | |||
| 20475 | M | M.Sens8899ORF5820P (100% identity) | GATC | M.SenJORF20475P |
| 20480 | exonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9395 | terminal oxidase subunit I | |||
| 9400 | R | Sens8899ORF17105P (99% identity) | CAGAG | SenJIP |
| 9405 | M | M.SspZ69ORF17325P (100% identity) | CAGAG | M.SenJI |
| 9410 | sialic acid transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11470 | HNH nuclease | |||
| 11475 | R | SenJMrr2P (100% identity) | SenJMrrP | |
| 11480 | toxin | |||
| 11470 | HNH nuclease | |||
| 11475 | R | SenJMrrP (100% identity) | SenJMrr2P | |
| 11480 | toxin | |||