Ref: Sorokin,D.Y. et al. ISME J 6 (12), 2245-2256 (2012)

REBASE ref # 15491

Contig set: 3,888,104 bp

GenBank #: CAGS00000000 (NZ_CAGS00000000)

REBASE acronym: Nho

Org_num: 10074

 

All begin NITHO_, ORF_

Type I
ORF Gene Most similar Specificity Name
 
??? M SAM-dependent methyltransferase M.NhoORFAP
1370002 110 aa hypothetical protein
1370003 R PbaPan97ORF39890P (69% identity) NhoORFAP
 
1 M M.Dac2973ORF1334P (45% identity) M.NhoORFCP
 
??? M type I restriction-modification protein subunit M M.NhoORFEP
2850002 325 aa conserved hypothetical protein
 
1360001 Abortive infection protein
1360002 S S2.Cep9333ORF2584P (17% identity) S.NhoORF1360003P
1360003 M M.Dve17965ORFBP (56% identity) M.NhoORF1360003P
 
2290004 81 aa hypothetical protein
2290005 R MspBLZ2ORFAP (70% identity) NhoORF2290008P
2290006 13 aa hypothetical protein
2290007 220 aa conserved hypothetical protein
2290008 M M.MspBLZ2ORFAP (78% identity) M.NhoORF2290008P
Type II
ORF Gene Most similar Specificity Name
 
??? RM AspB510ORF3480P (23% identity) NhoORFBP
1410002 157 aa hypothetical protein
 
??? RM Smi511283ORF24835P (14% identity) NhoORFDP
4090002 124 aa hypothetical protein
 
670002 conserved membrane hypothetical protein
670003 M M.Sth20745I (70% identity) TTAA M.NhoORF670003P
670004 Response regulator receiver domain protein
 
2770001 RM Cba153FORF11220P (37% identity) NhoORF2770001P
2770002 DNA polymerase beta domain protein region
 
420002 RM Sth20745III (65% identity) NhoORF420002P
 
4080003 206 aa conserved hypothetical protein
4080004 RM NspDNFORF2123P (38% identity) NhoORF4080004P
 
760006 22 aa hypothetical protein
760007 M M.Gsp2ORFFP (49% identity) CCGCGG M.NhoORF760007P
760008 R MspLL1ORF16435P (50% identity) CCGCGG NhoORF760007P
760009 V V.Nba1253ORF1559P (40% identity) V.NhoORF760007P
760010 84 aa hypothetical protein
 
1400007 93 aa hypothetical protein
1400009 RM NmoM1ORF3039BP (43% identity) NhoORF1400009P
 
3400008 inorganic polyphosphate/ATP-NAD kinase
3400009 RM Kra44963ORF86P (70% identity) NhoORF3400009P
3400010 DNA repair protein recO
 
5160017 107 aa hypothetical protein
5160018 RM Lsp6250ORFDP (7% identity) NhoORF5160018P
5160019 Helicase domain protein
 
160010 4-hydroxy-3-methylbut-2-enyl diphosphate
??? RM Sth20745ORF276P (78% identity) NhoORF160011P
160013 HAD-superfamily hydrolase, subfamily IA, variant
 
1020022 112 aa hypothetical protein
1020023 M M.NhoORF1020023P (100% identity) TCTAGA M.NhoORF20023P
1020024 100 aa hypothetical protein
 
1020022 112 aa hypothetical protein
1020023 M M.NhoORF20023P (100% identity) TCTAGA M.NhoORF1020023P
1020024 100 aa hypothetical protein
 
460031 63 aa hypothetical protein
460032 M M.Cph266ORF1501P (46% identity) GTCGAC M.NhoORF460032P
460033 R Rca13941ORF4293P (54% identity) GTCGAC NhoORF460032P
 
2210025 Glycosyl transferase group 1
2210026 C C.Pag976ORF2046P (48% identity) C.NhoORF2210028P
2210027 R Mko49807ORF8665P (40% identity) GGATCC NhoORF2210028P
2210028 M M.FspSL97ORF7995P (58% identity) GGATCC M.NhoORF2210028P
2210029 Histidyl-tRNA synthetase
Type III
ORF Gene Most similar Specificity Name
 
2210001 60 aa hypothetical protein
2210002 R Dsp106783ORF670P (75% identity) NhoORF2210003P
2210003 M M.DmcATV1ORF848P (64% identity) M.NhoORF2210003P
2210004 transposase
Tech Support Feedback NEB Overview Site Map Trademarks Legal and Disclaimers Privacy Cookie Policy Terms of Use
© Copyright 2023 New England Biolabs. All Rights Reserved.