Chloroflexus aurantiacus J-10-fl |
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Putative Chloroflexus aurantiacus J-10-fl RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10411
| Sequence length: | GenBank #: | |
| Chromosome: | 5,258,541 bp | CP000909 (NC_010175) |
| Chromosome: | 5,193,782 bp | AAAH00000000 (NZ_AAAH00000000) |
REBASE acronym: CauJ
Org_num: 3280
All begin Caur_, CaurDRAFT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1809 | protein of unknown function DUF224 cysteine-rich | |||
| 1810 | M | M.CspYORF1958P (100% identity) | M.CauJORF1810P | |
| 1811 | protein of unknown function DUF955 | |||
| 1812 | 165 aa conserved hypothetical protein | |||
| 1813 | S | S.CspYORF1958P (99% identity) | S.CauJORF1810P | |
| 1814 | 356 aa conserved hypothetical protein | |||
| 1815 | 305 aa hypothetical protein | |||
| 1816 | R | CspYORF1958P (100% identity) | CauJORF1810P | |
| 1817 | CBS domain containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 74 | polysaccharide biosynthesis protein | |||
| 75 | M | M.CspYORF79P (100% identity) | M.CauJORF75P | |
| 76 | 375 aa conserved hypothetical protein | |||
| 320 | flavodoxin | |||
| 321 | R | CspYORF346P (100% identity) | TCTAGA | CauJORF322P |
| 322 | M | M.CspYORF346P (100% identity) | TCTAGA | M.CauJORF322P |
| 323 | ABC transporter related | |||
| 657 | 307 aa conserved hypothetical protein | |||
| 658 | M | M.CspYORF713P (100% identity) | TCCGGA | M.CauJORF658P |
| 659 | R | CspYORF713P (100% identity) | TCCGGA | CauJORF658P |
| 660 | response regulator receiver | |||
| 720 | 1193 aa hypothetical protein | |||
| 721 | M | M.CspYORF781P (100% identity) | M.CauJORF721P | |
| 722 | 664 aa conserved hypothetical protein | |||
| 832 | 114 aa conserved hypothetical protein | |||
| 833 | R | CspYORF900P (100% identity) | GTCGAC | CauJORF833P |
| 834 | M | M.CspYORF900P (100% identity) | GTCGAC | M.CauJORF833P |
| 835 | NB-ARC domain protein | |||
| 840 | helicase domain protein | |||
| 841 | RM | CspYORF909P (100% identity) | CauJORF841P | |
| 842 | Sulfate transporter/antisigma-factor antagonist | |||
| 863 | 217 aa hypothetical protein | |||
| 864 | M | RNA methylase | GGATG | M.CauJORF864P |
| 865 | carbamoyl-phosphate synthase, small subunit | |||
| 985 | glycosyl transferase family 2 | |||
| 986 | M | M.CspYORF1077P (100% identity) | M.CauJORF986P | |
| 987 | phage SPO1 DNA polymerase-related protein | |||
| 1150 | AAA ATPase | |||
| 1151 | M | M.CspYORF1261P (100% identity) | GATC | M.CauJORF1151P |
| 1152 | ABC transporter related | |||
| 1241 | DNA gyrase, A subunit | |||
| 1242 | M | M.CspYORF1361P (100% identity) | RGATCY | M.CauJORF1242P |
| 1243 | R | CspYORF1361P (100% identity) | RGATCY | CauJORF1242P |
| 1244 | protein of unknown function DUF255 | |||
| 1686 | pentapeptide repeat protein | |||
| ??? | R | CspYORF1828P (100% identity) | CTGCAG | CauJORF1687P |
| ??? | M | M.CspYORF1828P (100% identity) | CTGCAG | M.CauJORF1687P |
| 1688 | excinuclease ABC, A subunit | |||
| 1720 | ribokinase | |||
| 1721 | M | M.CspYORF1865P (97% identity) | M.CauJORF1721P | |
| 1722 | 152 aa hypothetical protein | |||
| 1878 | glycosyl transferase group 1 | |||
| 1879 | M | M.CspYORF2030P (100% identity) | GANTC | M.CauJORF1879P |
| 1880 | 4Fe-4S ferredoxin iron-sulfur binding domain | |||
| 2524 | 158 aa hypothetical protein | |||
| 2525 | R | CspYORF2727P (98% identity) | CauJORF2526P | |
| 2526 | M | M.CspYORF2727P (100% identity) | M.CauJORF2526P | |
| 2527 | UspA domain protein | |||
| 2699 | helicase domain protein | |||
| 2700 | M | M.CspYORF2918P (100% identity) | M.CauJORF2700P | |
| 2701 | 466 aa conserved hypothetical protein | |||
| 2835 | lipoate-protein ligase B | |||
| 2836 | M | M.CspYORF3072P (100% identity) | TTCGAA | M.CauJORF2836P |
| 2837 | Carboxymuconolactone decarboxylase | |||
| 2920 | helix-hairpin-helix motif | |||
| 2921 | M | M.CspYORF3160P (100% identity) | M.CauJORF2921P | |
| 2922 | 206 aa conserved hypothetical protein | |||
| 3157 | WD-40 repeat protein | |||
| 3158 | R | 217 aa conserved hypothetical cytosolic protein | CAGCTG | CauJORF3159P |
| 3159 | M | M.CspYORF3411P (100% identity) | CAGCTG | M.CauJORF3159P |
| 3160 | Sua5/YciO/YrdC/YwlC family protein | |||
| 3351 | Phosphoglycerate mutase | |||
| 3352 | M | M.CspYORF3614P (100% identity) | GATATC | M.CauJORF3352P |
| 3353 | R | CspYORF3614P (100% identity) | GATATC | CauJORF3352P |
| 3354 | 395 aa conserved hypothetical protein | |||
| 3449 | ABC transporter related | |||
| 3450 | R | CspYORF3716P (100% identity) | CCTNAGG | CauJORF3451P |
| 3451 | M | M.CspYORF3716P (100% identity) | CCTNAGG | M.CauJORF3451P |
| 3452 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 3623 | 215 aa conserved hypothetical protein | |||
| 3624 | M | DNA adenine methylase | GATATC | M.CauJORF3624P |
| 3625 | TIS1421-transposase protein A | |||
| 3638 | inner-membrane translocator | |||
| 3639 | M | M.CspYORF3926P (100% identity) | GACGTC | M.CauJORF3639P |
| 3640 | 3-hydroxyisobutyrate dehydrogenase-like protein | |||
| Chromosome | ||||
| 2383 | 114 aa hypothetical protein | |||
| ??? | R | CspYORF900P (100% identity) | GTCGAC | CauJORF833P |
| 2385 | M | M.CspYORF900P (100% identity) | GTCGAC | M.CauJORF833P |
| 2386 | 223 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1848 | amidohydrolase | |||
| 1849 | R | CspYMrr2P (97% identity) | CauJMrr2P | |
| 1850 | 63 aa hypothetical protein | |||