Bordetella petrii DSM 12804 |
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Putative Bordetella petrii DSM 12804 RM systems
Ref: Gross,R. unpublished
REBASE ref # 10409
Complete sequence: 5,287,950 bp
GenBank #: AM902716 (NC_010170)
REBASE acronym: Bpe12804
Org_num: 4955
All begin Bpet, Bpetpseudo_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3988 | transposase | |||
| 3989 | S | S.Cmi6605ORF4197P (38% identity) | S.Bpe12804ORF3991P | |
| 3990 | 374 aa conserved hypothetical protein | |||
| 3991 | M | M.PflBS2ORFDP (95% identity) | M.Bpe12804ORF3991P | |
| 13 | R | pseudogene | Bpe12804ORF3991AP | |
| 3992 | transposase | |||
| 3993 | probable transposase | |||
| 14 | R | PflBS2ORFDP (80% identity) | Bpe12804ORF3991BP | |
| 3994 | 105 aa hypothetical protein Avin_52410 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 946 | 563 aa hypothetical protein | |||
| 947 | M | M2.Axy162ORF27090P (87% identity) | M.Bpe12804ORF947P | |
| 948 | 67 aa hypothetical protein predicted by | |||
| 1037 | DNA topoisomerase III | |||
| 1038 | M | M.BbrKU1201ORFBP (32% identity) | M.Bpe12804ORF1038AP | |
| 1039 | Tyrosine recombinase xerD. | |||
| 1040 | integrase/recombinase | |||
| 1041 | integrase/recombinase | |||
| 1042 | M | M.VspWDL1ORF76P (60% identity) | M.Bpe12804ORF1038BP | |
| 1043 | 185 aa hypothetical protein | |||
| 1295 | probable transcriptional regulator | |||
| 1296 | M | M.PtoKF710ORFBP (91% identity) | CCCGGG | M.Bpe12804ORF1296P |
| 1297 | single-stranded DNA binding protein | |||
| 1301 | pseudogene | |||
| 1302 | M | M.PtoKF710ORFAP (28% identity) | M.Bpe12804ORF1302AP | |
| 1303 | integrase/recombinase | |||
| 1304 | integrase/recombinase | |||
| 1305 | integrase/recombinase | |||
| 1306 | M | M.PtoKF710ORFAP (61% identity) | M.Bpe12804ORF1302BP | |
| 1307 | probable acetyltransferase | |||
| 1448 | DNA topoisomerase III | |||
| 1449 | M | DNA-cytosine methyltransferase | M.Bpe12804ORF1449AP | |
| 1450 | integrase/recombinase | |||
| 1451 | integrase/recombinase | |||
| 1452 | probable transposase | |||
| 1453 | transposase | |||
| 1454 | integrase/recombinase | |||
| 1455 | M | M.PpuRRORF11P (61% identity) | M.Bpe12804ORF1449BP | |
| 1456 | 185 aa conserved hypothetical protein | |||
| 4430 | tail fiber assembly protein | |||
| 4431 | M | site-specific DNA-methyltransferase | M.Bpe12804ORF4431P | |
| 4432 | shufflon-specific DNA recombinase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4235 | 271 aa hypothetical protein | |||
| 4236 | M | M.Eho3ORF2655P (81% identity) | M.Bpe12804ORF4236P | |
| 4237 | R | PspP16ORFGP (99% identity) | Bpe12804ORF4236P | |
| 4238 | 244 aa hypothetical protein | |||