Sorangium cellulosum So ce 56 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Sorangium cellulosum So ce 56 RM systems
Ref: Schneiker,S. et al. Nat. Biotechnol. 25 (11), 1281-1289 (2007)
REBASE ref # 10377
Complete sequence: 13,033,779 bp
GenBank #: AM746676 (NC_010162)
REBASE acronym: SceSo
Org_num: 4949
All begin sce
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5519 | 231 aa hypothetical protein predicted by | |||
| 5520 | M | M.Ssp836ORF6997P (87% identity) | M.SceSoORF5520P | |
| 5521 | S | S.Sce26ORF68220P (73% identity) | S.SceSoORF5520P | |
| 5522 | 476 aa hypothetical protein predicted by | |||
| 8508 | 264 aa hypothetical protein predicted by | |||
| 8509 | M | probable type I restriction-modification | M.SceSoORF8509P | |
| 8510 | positive regulator of sigma-B | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 318 | 672 aa hypothetical protein | |||
| 319 | M | M.Ssp836ORF560P (86% identity) | CTCGAG | M.SceSoORF319P |
| 320 | holo-acyl-carrier-protein-synthase | |||
| 1833 | 349 aa Hypothetical protein | |||
| 1834 | M | M.Fsp16386ORF16980P (40% identity) | TCTAGA | M.SceSoORF1834P |
| 1835 | 164 aa hypothetical protein predicted by | |||
| 2193 | 56 aa hypothetical protein | |||
| 2194 | RM | M.Sce1572ORF12680P (37% identity) | SceSoORF2194P | |
| 2195 | glutathione transferase | |||
| 2776 | 113 aa hypothetical protein predicted by | |||
| 2777 | M | M.Sce1572ORF17070P (90% identity) | M.SceSoORF2777P | |
| 2778 | 323 aa hypothetical protein predicted by | |||
| 3241 | 423 aa hypothetical protein | |||
| 3242 | RM | Sce1572ORF19395P (85% identity) | SceSoORF3242P | |
| 3243 | 1214 aa hypothetical protein | |||
| 7360 | protein of unknown function UPF0052 and CofD | |||
| 7361 | M | M.Ssp836ORF8715P (92% identity) | GACNNNGTC | M.SceSoORF7361P |
| 7362 | 87 aa hypothetical protein predicted by | |||
| 7675 | Protein kinase | |||
| 7676 | RM | NspE11ORF2215P (33% identity) | SceSoORF7676P | |
| 7677 | 158 aa hypothetical protein | |||
| 7792 | 327 aa hypothetical protein | |||
| 7793 | M | M.Ssp836ORF10078P (63% identity) | CTGCAG | M.SceSoORF7793P |
| 7794 | 361 aa hypothetical protein Deide_18710 | |||
| 8072 | two-component response regulator | |||
| 8073 | RM | Sce1572ORF46805P (71% identity) | SceSoORF8073P | |
| 8074 | 248 aa hypothetical protein | |||
| 9357 | 303 aa hypothetical penicillin-insensitive | |||
| 9358 | M | M.Ssp836ORF10695P (91% identity) | M.SceSoORF9358P | |
| 9359 | translation factor | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3247 | 201 aa hypothetical protein predicted by | |||
| 3248 | R | 575 aa hypothetical protein | SceSoMcrBP | |
| 3249 | 528 aa hypothetical protein predicted by | |||
| 5121 | 295 aa hypothetical protein | |||
| 5122 | R | Sce1572MrrP (84% identity) | SceSoMrrP | |
| 5123 | 130 aa hypothetical protein predicted by | |||
| 8202 | 400 aa hypothetical protein predicted by | |||
| 8203 | R | HocMcrB2P (31% identity) | SceSoMcrB2P | |
| 8204 | helicase | |||