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Putative Methanomethylovorans hollandica DSM 15978 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 15416
Sequence length: | GenBank #: | |
Chromosome: | 2,428,904 bp | CP003362 |
plasmid pMETHO01: | 285,109 bp | CP003363 |
REBASE acronym: Mho15978
Org_num: 9887
All begin Metho_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
316 | PAS domain S-box | |||
317 | M | M.MmaTMAORF27060P (89% identity) | M.Mho15978ORF317P | |
318 | NADPH-dependent FMN reductase | |||
319 | pseudogene | |||
320 | S | S.MbuDORF506P (52% identity) | S.Mho15978ORF317P | |
321 | transcriptional regulator with HTH | |||
322 | R | MmeMM1ORF1356P (81% identity) | Mho15978ORF317P | |
323 | DNA modification methylase | |||
632 | looped-hinge helix DNA binding domain, AbrB | |||
633 | M | M.MbaCM1ORF2882P (85% identity) | M.Mho15978ORF633P | |
634 | Protein of unknown function (DUF1016) | |||
635 | TIGR02391 family protein | |||
636 | S | S1.Psp1480ORF8930P (38% identity) | S.Mho15978ORF633P | |
637 | 219 aa hypothetical protein | |||
638 | 236 aa hypothetical protein | |||
639 | R | MbaCM1ORF2882P (79% identity) | Mho15978ORF633P | |
640 | 114 aa hypothetical protein | |||
1312 | metal-dependent hydrolase, beta-lactamase | |||
1314 | M | M.MhoHB1ORF3128P (95% identity) | M.Mho15978ORF1314P | |
1315 | 82 aa hypothetical protein | |||
1316 | ORF6N domain-containing protein | |||
1317 | S | S.UarANMEORFJP (47% identity) | S.Mho15978ORF1314P | |
1318 | 183 aa hypothetical protein | |||
1319 | 274 aa hypothetical protein | |||
1320 | virulence protein | |||
1321 | 83 aa hypothetical protein | |||
1322 | R | MsiC2JORF2142P (93% identity) | Mho15978ORF1314P | |
1323 | CRISPR-associated endonuclease Cas1 | |||
1366 | Domain of unknown function | |||
1367 | M | M.MspKolORF978P (84% identity) | M.Mho15978ORF1367P | |
1368 | S | S.LalTS1ORF3865P (44% identity) | S.Mho15978ORF1367P | |
1369 | transcriptional regulator with HTH | |||
1370 | R | MmaGORF2294P (84% identity) | Mho15978ORF1367P | |
1371 | metal-dependent hydrolase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
322 | helicase, type I site-specific | |||
323 | M | M.Mps15ORF1336P (61% identity) | M.Mho15978ORF323P | |
324 | 326 aa hypothetical protein | |||
1390 | 105 aa hypothetical protein | |||
1391 | RM | Mps15ORF148BP (55% identity) | Mho15978ORF1391BP | |
1392 | 147 aa hypothetical protein | |||
1393 | transcriptional regulator with HTH | |||
1394 | RM | Mps15ORF148AP (83% identity) | Mho15978ORF1391AP | |
1395 | 1187 aa hypothetical protein | |||
2383 | nicotinate-nucleotide pyrophosphorylase | |||
2384 | RM | Mmazm15ORF7525P (74% identity) | Mho15978ORF2384P | |
2385 | acetate--CoA ligase | |||
plasmid pMETHO01 | ||||
2700 | pseudogene | |||
2701 | M | DNA-methyltransferase Dcm | M.Mho15978ORF2701P | |
2702 | 98 aa hypothetical protein | |||
2717 | 122 aa hypothetical protein | |||
2718 | M | M1.CklORF3292P (33% identity) | M.Mho15978ORF2718P | |
2719 | 155 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid pMETHO01 | ||||
2582 | 245 aa hypothetical protein | |||
2583 | M | M.PmeBin199ORFAP (44% identity) | M.Mho15978ORF2583P | |
2584 | R | Nar2447ORF7200P (69% identity) | Mho15978ORF2583P | |
2585 | 440 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1713 | copper ion binding protein | |||
1714 | R | Mzh4017MrrP (36% identity) | Mho15978MrrP | |
1715 | thioredoxin |