Thermobacillus composti KWC4 |
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Putative Thermobacillus composti KWC4 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 15337
| Sequence length: | GenBank #: | |
| Chromosome: | 4,206,343 bp | CP003255 |
| plasmid pTHECO01: | 149,182 bp | CP003256 |
REBASE acronym: TcoKWC4
Org_num: 9783
All begin Theco_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3406 | 496 aa hypothetical protein | |||
| 3407 | M | M.Bsp7484ORFCP (64% identity) | CCANNNNNNCTC | M.TcoKWC4IV |
| 3408 | S | S.TstRKWS1ORF454P (39% identity) | CCANNNNNNCTC | S.TcoKWC4IV |
| 3409 | R | Bsp7484ORFCP (72% identity) | CCANNNNNNCTC | TcoKWC4IVP |
| 3410 | response regulator with CheY-like receiver | |||
| 3620 | 471 aa hypothetical protein | |||
| 3621 | R | AspTCORF3430P (27% identity) | TcoKWC4ORF3621P | |
| 3622 | DNA mismatch endonuclease Vsr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11 | beta-1,4-xylanase | |||
| 12 | M | M.Sgl8271II (33% identity) | ATTAAT | M.TcoKWC4V |
| 13 | membrane protein | |||
| 806 | phosphoenolpyruvate synthase/pyruvate phosphate | |||
| 807 | R | Afa3000ORF21310P (63% identity) | CCWGG | TcoKWC4IIP |
| 808 | V | V.PmaI6ORF4990P (63% identity) | V.TcoKWC4IIP | |
| 809 | M | M.PmaI6ORF4990P (74% identity) | CCWGG | M.TcoKWC4II |
| 810 | ADP-ribose pyrophosphatase | |||
| 2803 | 195 aa hypothetical protein | |||
| 2804 | M | M.Psp2237ORF1466P (66% identity) | M.TcoKWC4ORF2804P | |
| 3439 | 165 aa hypothetical protein | |||
| 3440 | M | M.AfeH14ORF1080P (57% identity) | GTATAC | M.TcoKWC4I |
| 3441 | ABC-type nitrate/sulfonate/bicarbonate transport | |||
| 3621 | Type I restriction-modification system restriction subunit | |||
| 3622 | V | V.BspBB3R1ORF8750P (74% identity) | GCWGC | V.TcoKWC4IIIP |
| 3623 | R | R2.BspCC42ORF555P (69% identity) | GCWGC | TcoKWC4IIIP |
| 3624 | M | M.BspBB3R1ORF8750P (81% identity) | GCWGC | M.TcoKWC4III |
| 3625 | 138 aa hypothetical protein | |||
| plasmid pTHECO01 | ||||
| 3974 | 166 aa hypothetical protein | |||
| 3975 | M | M.PspY2ORFHP (59% identity) | M.TcoKWC4ORF3975P | |
| 3976 | 220 aa hypothetical protein | |||
| 4113 | 29 aa hypothetical protein | |||
| 4114 | M | M.Bce4088ORF5361P (47% identity) | M.TcoKWC4ORF4114P | |
| 4115 | 343 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 85 | cytosine/adenosine deaminase | |||
| 87 | R | Psp32OWIP (65% identity) | TcoKWC4ORF88P | |
| 88 | M | M.Csp8OORF6580P (49% identity) | M.TcoKWC4ORF88P | |
| 89 | ADP-ribose pyrophosphatase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2809 | pseudogene | |||
| 2810 | R | DspOTORF3852P (57% identity) | TcoKWC4ORF2810P | |
| 2811 | 69 aa hypothetical protein | |||