Thioalkalivibrio nitratireducens DSM 14787 |
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Putative Thioalkalivibrio nitratireducens DSM 14787 RM systems
Ref: Tikhonova,T.V. et al. unpublished
REBASE ref # 15356
Complete sequence: 4,002,350 bp
GenBank #: CP003989
REBASE acronym: Tni14787
Org_num: 9813
All begin TVNIR_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1042 | 79 aa hypothetical protein | |||
| 1043 | M | M.TpaARh1ORF11505P (96% identity) | M.Tni14787ORF1043P | |
| 1044 | 74 aa hypothetical protein | |||
| 1045 | S | S.AspT1ORFAP (47% identity) | S.Tni14787ORF1043P | |
| 1046 | methionine sulfoxide reductase A | |||
| 1047 | Helix-turn-helix protein, CopG family | |||
| 1048 | killer suppression protein HigA, putative | |||
| 1049 | XRE family transcriptional regulator, plasmid | |||
| 1050 | R | TpaARh1ORF11505P (97% identity) | Tni14787ORF1043P | |
| 1051 | alkylhydroperoxidase AhpD domain protein | |||
| 1155 | addiction module toxin, Txe/YoeB family | |||
| 1157 | R | TpaARh1ORF11065P (24% identity) | Tni14787ORF1157P | |
| 1158 | exported protein | |||
| 1852 | metal-dependent hydrolase | |||
| 1853 | R | TpaARh1ORF7200P (97% identity) | Tni14787ORF1859P | |
| 1854 | ATP-dependent DNA helicase | |||
| 1855 | protein of unknown function DUF1016 | |||
| 1856 | ATP-dependent DNA helicase-like protein | |||
| 1857 | ATPase involved in DNA repair | |||
| 1858 | S | S.TpaARh1ORF7200P (97% identity) | S.Tni14787ORF1859P | |
| 1859 | M | M.TpaARh1ORF7200P (95% identity) | M.Tni14787ORF1859P | |
| 1860 | Protein RtcB | |||
| 2313 | NmrA family protein | |||
| 2314 | R | TpaARh1ORF11065P (63% identity) | Tni14787ORF2314P | |
| 2315 | 111 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 41 | protein containing transposase DDE domain | |||
| 42 | M | M.Tni14787ORF2442P (71% identity) | M.Tni14787ORF42P | |
| 43 | transposase IS66 | |||
| 1491 | transposase, IS66 family | |||
| 1492 | M | M.Tni14787ORF2442P (88% identity) | M.Tni14787ORF1492P | |
| 1494 | 414 aa hypothetical protein | |||
| 1735 | Peptidase C14, caspase catalytic subunit p20 | |||
| 1736 | M | M.Tni14787ORF1492P (88% identity) | M.Tni14787ORF2442P | |
| 1737 | transposase, IS66 family | |||
| 2272 | 136 aa hypothetical protein | |||
| 2274 | RM | TpaARh1ORF1105P (86% identity) | Tni14787ORF2274P | |
| 2275 | Transposase-like protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3290 | 497 aa hypothetical protein | |||
| 3291 | M | M.HspPGE1ORF13110P (62% identity) | M.Tni14787ORF3291P | |
| 3292 | 388 aa hypothetical protein | |||
| 3293 | 159 aa hypothetical protein | |||
| 3294 | R | HsoCKY01ORFCP (71% identity) | Tni14787ORF3291P | |
| 3295 | 86 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1690 | 46 aa hypothetical protein | |||
| 1691 | R | Car11915MrrP (89% identity) | Tni14787MrrP | |
| 1692 | transposase, IS91 family, putative | |||
| 3284 | DNA polymerase beta subunit | |||
| 3285 | R | TspS2ORF17329P (67% identity) | Tni14787ORF3285P | |
| 3286 | Putative | |||