Sinorhizobium meliloti GR4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Sinorhizobium meliloti GR4 RM systems
Ref: Martinez-Abarca,F. et al. unpublished
REBASE ref # 15590
| Sequence length: | GenBank #: | |
| Chromosome: | 3,620,713 bp | CP003933 |
| plasmid pRmeGR4a: | 175,983 bp | CP003934 |
| plasmid pRmeGR4c: | 1,417,907 bp | CP003936 |
REBASE acronym: Sme4
Org_num: 9795
All begin C770_GR4Chr, C770_GR4pA, C770_GR4pC
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 589 | Site-specific recombinase, DNA invertase | |||
| 590 | M | M.Ega24692ORF982P (94% identity) | M.Sme4ORF590P | |
| 591 | S | S.Sme1750ORF4625P (48% identity) | S.Sme4ORF590P | |
| 592 | R | SmeM162ORFCP (92% identity) | Sme4ORF590P | |
| 593 | Integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRmeGR4a | ||||
| 22 | 61 aa hypothetical protein | |||
| 23 | M | M.Rae950ORFFP (90% identity) | ACCGGT | M.Sme4ORF23P |
| 24 | 200 aa hypothetical protein | |||
| 25 | V | V.Ret42ORF108P (91% identity) | V.Sme4ORF23P | |
| 26 | 169 aa hypothetical protein | |||
| 25 | DNA mismatch endonuclease Vsr | |||
| 26 | R | Rae950ORFGP (94% identity) | GCNGC | Sme4ORF26P |
| 27 | 276 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRmeGR4c | ||||
| 239 | 306 aa hypothetical protein | |||
| 240 | R | SspK101McrCP (73% identity) | Sme4McrCP | |
| 241 | R | SspK101McrBP (90% identity) | Sme4McrBP | |
| 242 | Exonuclease III | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 925 | transcriptional regulator | |||
| 926 | M | M.Smeml66ORF20050P (100% identity) | GANTC | M.Sme4ORF926P |
| 927 | haloacid dehalogenase superfamily, subfamily IA, | |||