Dactylococcopsis salina PCC 8305 |
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Putative Dactylococcopsis salina PCC 8305 RM systems
Ref: Gugger,M. et al. unpublished
REBASE ref # 15354
Complete sequence: 3,781,008 bp
GenBank #: CP003944
REBASE acronym: Dsa8305
Org_num: 9810
All begin Dacsa_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2100 | DEAD/DEAH box helicase | |||
| 2101 | M | type I restriction-modification system subunit M | M.Dsa8305ORF2101P | |
| 2102 | S | S.IceTR32ORF8960P (43% identity) | S.Dsa8305ORF2101P | |
| 2103 | 197 aa hypothetical protein | |||
| 2104 | 176 aa hypothetical protein | |||
| 2105 | R | 250 aa hypothetical protein | Dsa8305ORF2101P | |
| 2106 | metal-dependent hydrolase | |||
| 2748 | 60 aa hypothetical protein | |||
| 2749 | S | S.MbaWORF2222P (35% identity) | S.Dsa8305ORF2750P | |
| 2750 | M | M.DspB1220ORF18975P (76% identity) | M.Dsa8305ORF2750P | |
| 2751 | 78 aa hypothetical protein | |||
| 2752 | R | LboDg5ORFJP (51% identity) | Dsa8305ORF2750P | |
| 2753 | ATPase involved in chromosome partitioning | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5 | P pilus assembly/Cpx signaling pathway, | |||
| 6 | R | PspFMAR1ORFEP (51% identity) | GATC | Dsa8305ORF7P |
| 7 | M | M.Scy7437ORF4850P (61% identity) | GATC | M.Dsa8305ORF7P |
| 8 | 117 aa hypothetical protein | |||
| 11 | DNA-binding regulatory protein, YebC/PmpR | |||
| 12 | M | M.Tbr12168ORF84P (63% identity) | CCWWGG | M.Dsa8305ORF12P |
| 13 | transposase, IS605 OrfB family, central region | |||
| 99 | nucleotidyltransferase | |||
| 100 | M | M.Ael3563ORF2385P (50% identity) | M.Dsa8305ORF100P | |
| 101 | periplasmic or secreted lipoprotein | |||
| 207 | 273 aa hypothetical protein | |||
| 208 | RM | Mae905ORF17010P (70% identity) | Dsa8305ORF208P | |
| 209 | 707 aa hypothetical protein | |||
| 609 | 169 aa hypothetical protein | |||
| 610 | M | M.Mcl10199ORF1465P (37% identity) | GCNGC | M.Dsa8305ORF610P |
| 611 | riboflavin synthase, alpha subunit | |||
| 748 | DNA primase, catalytic core | |||
| 749 | M | M.Hsp7418ORF3186P (93% identity) | GGWCC | M.Dsa8305ORF749P |
| 750 | R | Dco806ORF28270P (56% identity) | GGWCC | Dsa8305ORF749P |
| 751 | 96 aa hypothetical protein | |||
| 775 | 63 aa hypothetical protein | |||
| 776 | M | M.DsaV (100% identity) | CCNGG | M.Dsa8305ORF776P |
| 777 | R | DsaV (34% identity) | CCNGG | Dsa8305ORF776P |
| 778 | chromosome segregation protein SMC | |||
| 778 | chromosome segregation protein SMC | |||
| 779 | R | GprBW2ORF12835P (67% identity) | GTMKAC | Dsa8305ORF780P |
| 780 | M | M.Mae2549ORF2818P (50% identity) | GTMKAC | M.Dsa8305ORF780P |
| 781 | 543 aa hypothetical protein | |||
| 1065 | Glycerophosphoryl diester phosphodiesterase | |||
| 1066 | R | Afl2012ORF3700P (65% identity) | CCRYGG | Dsa8305ORF1067P |
| 1067 | M | M.Afl2012ORF3700P (57% identity) | CCRYGG | M.Dsa8305ORF1067P |
| 1068 | adenine phosphoribosyltransferase | |||
| 1279 | cysteine desulfurase-like protein, SufS | |||
| 1280 | M | M.EnaZM001ORF6270P (76% identity) | M.Dsa8305ORF1280P | |
| 1281 | DNA-binding protein, YbaB/EbfC family | |||
| 1284 | glyceraldehyde-3-phosphate dehydrogenase, type | |||
| 1285 | M | M.BstYI (59% identity) | RGATCY | M.Dsa8305ORF1285P |
| 1286 | R | Dma2077ORF77620P (57% identity) | RGATCY | Dsa8305ORF1285P |
| 1287 | dihydroxy-acid dehydratase | |||
| 2015 | PsbJ | |||
| 2016 | M | M.Csp7822ORF247P (64% identity) | RGCGCY | M.Dsa8305ORF2016P |
| 2017 | small GTP-binding protein domain protein | |||
| 2260 | acetate kinase | |||
| 2261 | M | M.EnaZM001ORF15200P (8% identity) | AATATT | M.Dsa8305ORF2261BP |
| 2262 | transposase | |||
| 2263 | M | M.EnaZM001ORF15200P (69% identity) | AATATT | M.Dsa8305ORF2261AP |
| 2264 | pseudogene | |||
| 2321 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | |||
| 2322 | M | M.Hsp7418ORF2575P (37% identity) | CCWGG | M.Dsa8305ORF2322P |
| 2323 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | |||
| 2422 | 67 aa hypothetical protein | |||
| 2423 | M | M.EnaZM001ORF16270P (84% identity) | GGCC | M.Dsa8305ORF2423P |
| 2424 | 275 aa hypothetical protein | |||
| 2603 | cobalamin 5-phosphate synthase/cobalamin | |||
| 2604 | M | M.EnaZM001ORF9190P (77% identity) | CCGG | M.Dsa8305ORF2604P |
| 2605 | Ribbon-helix-helix protein, copG family | |||
| 2949 | glycosyltransferase | |||
| 2950 | M | M.TspsTA1ORF10670P (61% identity) | M.Dsa8305ORF2950P | |
| 2951 | glutathione-disulfide reductase, plant | |||
| 3146 | L-aspartate oxidase | |||
| 3147 | R | EnaZM001ORF13180P (72% identity) | CGATCG | Dsa8305ORF3149P |
| 3148 | transposase | |||
| 3149 | M | M.EnaZM001ORF13180P (78% identity) | CGATCG | M.Dsa8305ORF3149P |
| 3150 | 216 aa hypothetical protein | |||
| 3208 | ATP-dependent chaperone ClpB | |||
| 3209 | M | M.Tel542ORF4610P (56% identity) | M.Dsa8305ORF3209P | |
| 3210 | 74 aa hypothetical protein | |||
| 3363 | 45 aa hypothetical protein | |||
| 3364 | M | M.Dsa8305ORFAP (89% identity) | M.Dsa8305ORF3364P | |
| 3365 | radical SAM-linked protein/radical SAM family | |||
| 3363 | 45 aa hypothetical protein | |||
| 3364 | M | M.Dsa8305ORF3364P (89% identity) | CTGCAG | M.Dsa8305ORFAP |
| 3365 | radical SAM-linked protein/radical SAM family | |||
| 3452 | D-alanyl-D-alanine dipeptidase | |||
| 3453 | RM | SspHK05ORF45180P (54% identity) | Dsa8305ORF3453P | |
| 3454 | abortive infection bacteriophage resistance | |||
| 3571 | 207 aa hypothetical protein | |||
| 3572 | RM | MaeM03ORF8045P (68% identity) | Dsa8305ORF3572P | |
| 3574 | 60 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1948 | TIGR02646 family protein | |||
| 1949 | M | M.DteS28bFORFFP (69% identity) | M.Dsa8305ORF1949P | |
| 1950 | 74 aa hypothetical protein | |||