Cyanobacterium aponinum PCC 10605 |
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Putative Cyanobacterium aponinum PCC 10605 RM systems
Ref: Gugger,M. et al. unpublished
REBASE ref # 15327
Complete sequence: 4,114,099 bp
GenBank #: CP003947
REBASE acronym: Cap10605
Org_num: 9812
All begin Cyan10605_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2895 | 904 aa hypothetical protein | |||
| 2897 | S | FpsTRORFFP (10% identity) | S.Cap10605ORF2897P | |
| 2898 | N-6 DNA methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 87 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate | |||
| 88 | M | M.Cap8ORF450P (98% identity) | GATC | M.Cap10605ORF88P |
| 89 | glyceraldehyde-3-phosphate dehydrogenase (NAD+) | |||
| 486 | 3-oxoacyl-(acyl-carrier-protein) reductase | |||
| 487 | M | M.Cap8ORF10340P (98% identity) | GGCC | M.Cap10605ORF487P |
| 488 | R | Cap1201ORF9400P (99% identity) | GGCC | Cap10605ORF487P |
| 489 | glutamate synthase (NADH) large subunit | |||
| 573 | Ribosomal RNA small subunit methyltransferase H | |||
| 574 | RM | Cap8ORF9890P (94% identity) | Cap10605ORF574P | |
| 575 | shikimate dehydrogenase | |||
| 716 | 71 aa hypothetical protein | |||
| 717 | M | M.Cap3222ORF11975P (98% identity) | GCGC | M.Cap10605ORF717P |
| 718 | R | Cap3222ORF11975P (55% identity) | Cap10605ORF717P | |
| 719 | cobaltochelatase CobN subunit | |||
| 1162 | DinB family protein | |||
| 1163 | M | M.Cspa4ORF3785P (98% identity) | TCTAGA | M.Cap10605ORF1163P |
| ??? | R | Gsp3709ORF2272P (38% identity) | TCTAGA | Cap10605ORF1163P |
| 1166 | 69 aa hypothetical protein | |||
| 1587 | Tetratricopeptide TPR_1 repeat-containing | |||
| 1588 | RM | Cap3222ORF15335P (97% identity) | Cap10605ORF1588P | |
| 1589 | UPF0060 membrane protein ynfA | |||
| 1883 | PilT domain-containing protein | |||
| 1884 | M | M.Cspa4ORF4535P (87% identity) | M.Cap10605ORF1884P | |
| 1885 | 340 aa hypothetical protein | |||
| 1929 | membrane protease FtsH catalytic subunit | |||
| 1930 | RM | Cap8ORF3165P (87% identity) | Cap10605ORF1930P | |
| 1931 | 257 aa hypothetical protein | |||
| 2076 | Protein of unknown function DUF2062 | |||
| 2077 | M | M.Cap3221DndCP (100% identity) | M.Cap10605DndCP | |
| 2078 | 309 aa hypothetical protein | |||
| 2106 | LL-diaminopimelate aminotransferase apoenzyme | |||
| 2107 | M | M.Cap8ORF2330P (100% identity) | GDGCHC | M.Cap10605ORF2107P |
| 2108 | R | Cap8ORF2330P (62% identity) | GDGCHC | Cap10605ORF2107P |
| 2109 | methyltransferase | |||
| 2124 | 400 aa hypothetical protein | |||
| 2125 | M | C-5 cytosine-specific DNA methylase | GGNCC | M.Cap10605ORF2125P |
| 2126 | Histone deacetylase | |||
| 2307 | Aldehyde Dehydrogenase | |||
| 2308 | RM | Cap8ORF1385P (89% identity) | Cap10605ORF2308P | |
| 2309 | Rieske (2Fe-2S) iron-sulfur domain protein | |||
| 2429 | 320 aa hypothetical protein | |||
| 2430 | M | type II DNA modification methylase | CCNNGG | M.Cap10605ORF2430P |
| 2431 | 303 aa hypothetical protein | |||
| 2458 | von Willebrand factor type A | |||
| 2459 | R | Cap1201ORF2995P (100% identity) | CGATCG | Cap10605ORF2460P |
| 2460 | M | M.Cap1201ORF2995P (100% identity) | CGATCG | M.Cap10605ORF2460P |
| 2461 | RNA polymerase, sigma 28 subunit, FliA/WhiG | |||
| 2897 | restriction modification system DNA specificity | |||
| 2898 | RM | N-6 DNA methylase | Cap10605ORF2898P | |
| 2899 | PilT protein domain protein | |||
| 3012 | Cupin 2 conserved barrel domain protein | |||
| 3013 | M | M2.Cap3222ORF4440P (98% identity) | GCGC | M.Cap10605ORF3013P |
| 3014 | DNA-cytosine methyltransferase | |||
| 3013 | DNA-cytosine methyltransferase | |||
| 3014 | M | M1.Cap3222ORF4440P (100% identity) | CGATCG | M.Cap10605ORF3014P |
| 3015 | 435 aa hypothetical protein Cyan10605_2828 | |||
| 3226 | 50 aa hypothetical protein | |||
| 3227 | RM | Cap1201ORF14430P (98% identity) | Cap10605ORF3227P | |
| 3228 | nitric oxide reductase, NorZ apoprotein | |||
| 3323 | YcfA family protein | |||
| 3324 | M | M.Mae9443ORF5570008P (77% identity) | GAATTC | M.Cap10605ORF3324P |
| 3325 | protein of unknown function DUF433 | |||
| 3473 | protein of unknown function DUF820 | |||
| 3474 | RM | Cspa4ORF3715P (92% identity) | Cap10605ORF3474P | |
| 3475 | NAD(P)-dependent nickel-iron dehydrogenase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2494 | 715 aa hypothetical protein | |||
| 2495 | R | 902 aa hypothetical protein | Cap10605McrB2P | |
| 2496 | 546 aa hypothetical protein | |||
| 2496 | 546 aa hypothetical protein | |||
| 2497 | R | superfamily I DNA/RNA helicase | Cap10605McrB3P | |
| 2498 | serine/threonine protein kinase | |||