Cylindrospermum stagnale PCC 7417 |
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Putative Cylindrospermum stagnale PCC 7417 RM systems
Ref: Gugger,M. et al. unpublished
REBASE ref # 15326
| Sequence length: | GenBank #: | |
| Chromosome: | 7,003,560 bp | CP003642 |
| plasmid pCYLST.01: | 431,821 bp | CP003643 |
| plasmid pCYLST.02: | 154,332 bp | CP003644 |
REBASE acronym: Cst7417
Org_num: 9789
All begin Cylst_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4785 | haloacid dehalogenase superfamily enzyme, | |||
| 4787 | R | Tva0441ORF23360P (94% identity) | Cst7417ORF4792P | |
| 4788 | 206 aa hypothetical protein | |||
| 4789 | nucleic acid-binding protein, contains | |||
| 4790 | 71 aa hypothetical protein | |||
| 4791 | S | S.TspASORF16580P (46% identity) | S.Cst7417ORF4792P | |
| 4792 | M | M.Tva0441ORF23360P (47% identity) | M.Cst7417ORF4792P | |
| 4793 | acetyltransferase (isoleucine patch | |||
| 5064 | peptidase family protein | |||
| 5065 | S | S.Asp43ORFSP (64% identity) | S.Cst7417ORF5067P | |
| 5066 | 212 aa hypothetical protein | |||
| 5067 | M | M.Hby512170ORF10000P (84% identity) | M.Cst7417ORF5067P | |
| 5068 | transposase | |||
| 5069 | R | Sto24ORF985P (85% identity) | Cst7417ORF5067P | |
| 5071 | Protein of unknown function (DUF3493) | |||
| 5219 | 42 aa hypothetical protein | |||
| 5220 | R | Dhe447ORF4780P (81% identity) | Cst7417ORF5223P | |
| 5221 | 406 aa hypothetical protein | |||
| 5222 | S | S.Sto61278ORF10285P (53% identity) | S.Cst7417ORF5223P | |
| 5223 | M | M.Afl81ORFH1P (80% identity) | M.Cst7417ORF5223P | |
| 5224 | transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 503 | Cytochrome b(N-terminal)/b6/petB | |||
| 504 | M | M.Csp4074ORF30660P (77% identity) | GGCC | M.Cst7417ORF504P |
| 505 | anthranilate phosphoribosyltransferase | |||
| 1012 | arginine/lysine/ornithine decarboxylase | |||
| 1013 | R | Csp7507ORF4224P (86% identity) | GGATCC | Cst7417ORF1014P |
| 1014 | M | M.NspMS1ORF54080P (84% identity) | GGATCC | M.Cst7417ORF1014P |
| 1015 | DNA-binding protein, excisionase family | |||
| 1242 | Obg family GTPase CgtA | |||
| 1243 | M | Type I Restriction Enzyme | M.Cst7417ORF1243P | |
| 1244 | 101 aa hypothetical protein | |||
| 1540 | ABC-type multidrug transport system, ATPase | |||
| 1541 | RM | NspNUC1ORF123P (70% identity) | Cst7417ORF1541P | |
| 1542 | DNA/RNA helicase, superfamily II | |||
| 1714 | 484 aa hypothetical protein | |||
| 1715 | M | M.Nli25ORF49840P (74% identity) | GGWCC | M.Cst7417ORF1715P |
| 1716 | 212 aa hypothetical protein | |||
| 2041 | ribulose bisphosphate carboxylase small subunit | |||
| 2042 | M | M.Nsp7524ORF1123P (77% identity) | GCSGC | M.Cst7417ORF2042P |
| 2043 | ribulose bisphosphate carboxylase small subunit | |||
| 2309 | Protein of unknown function (DUF751) | |||
| 2310 | M | M.Csp4074ORF58060P (81% identity) | GATC | M.Cst7417ORF2310P |
| 2311 | 158 aa hypothetical protein | |||
| 2356 | phytoene/squalene synthetase | |||
| 2357 | M | M.Ncf36ORF31320P (89% identity) | CAGCTG | M.Cst7417ORF2357P |
| 2358 | molybdopterin-dependent oxidoreductase alpha | |||
| 2999 | 248 aa hypothetical protein | |||
| 3000 | M | M.Csp4074ORF49700P (84% identity) | M.Cst7417ORF3000P | |
| 3001 | deoxyribose-phosphate aldolase | |||
| 3014 | 266 aa hypothetical protein | |||
| 3015 | RM | Acy7122ORF3953P (88% identity) | Cst7417ORF3015P | |
| 3016 | protein of unknown function DUF29 | |||
| 3067 | 303 aa hypothetical protein | |||
| 3068 | M | M.Csp4074ORF50410P (82% identity) | CGATCG | M.Cst7417ORF3068P |
| 3069 | lipid-A-disaccharide synthase | |||
| 3380 | growth inhibitor | |||
| 3381 | M | site-specific DNA methylase | GGYRCC | M.Cst7417ORF3381P |
| 3382 | heme iron utilization protein | |||
| 3540 | 184 aa hypothetical protein | |||
| 3541 | M | M.Csp7507ORF1617P (81% identity) | M.Cst7417ORF3541P | |
| 3542 | 35 aa hypothetical protein | |||
| 4503 | 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, | |||
| 4504 | M | M.Csp4074ORF9200P (92% identity) | CTGCAG | M.Cst7417ORF4504P |
| 4505 | triosephosphate isomerase | |||
| 5203 | 606 aa hypothetical protein | |||
| 5204 | M | site-specific DNA methylase | M.Cst7417ORF5204P | |
| 5205 | 160 aa hypothetical protein | |||
| plasmid pCYLST.01 | ||||
| 6604 | anaerobic dehydrogenase, typically | |||
| 6605 | R | Csp7507ORF4009P (84% identity) | Cst7417ORF6610P | |
| 6606 | 107 aa hypothetical protein | |||
| 6607 | 230 aa hypothetical protein | |||
| 6608 | 90 aa hypothetical protein | |||
| 6609 | aspartyl protease | |||
| 6610 | M | M.SspHK05ORF74150P (75% identity) | M.Cst7417ORF6610P | |
| 6611 | 142 aa hypothetical protein | |||
| plasmid pCYLST.02 | ||||
| 6324 | 70 aa hypothetical protein | |||
| 6325 | M | M.NspN6ORF2030P (93% identity) | M.Cst7417ORF6325P | |
| 6326 | 105 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2160 | pentulose/hexulose kinase | |||
| 2161 | R | Nca2107McrCP (71% identity) | Cst7417McrCP | |
| 2162 | R | Asp90McrBP (33% identity) | Cst7417McrBP | |
| 2163 | N-acetylglucosamine kinase | |||