Chamaesiphon minutus PCC 6605 |
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Putative Chamaesiphon minutus PCC 6605 RM systems
Ref: Gugger,M. et al. unpublished
REBASE ref # 15335
| Sequence length: | GenBank #: | |
| Chromosome: | 6,284,095 bp | CP003600 |
| plasmid pCHA6605.01: | 446,651 bp | CP003601 |
REBASE acronym: Cmi6605
Org_num: 9779
All begin Cha6605_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 483 | metal-dependent hydrolase | |||
| 484 | R | Csp4074ORF66000P (67% identity) | Cmi6605ORF486P | |
| 485 | S | S.PbaPla110ORF45470P (40% identity) | S.Cmi6605ORF486P | |
| 486 | M | M.Csp4074ORF66000P (80% identity) | M.Cmi6605ORF486P | |
| 487 | 1062 aa hypothetical protein | |||
| 1443 | 725 aa hypothetical protein | |||
| 1445 | R | AolS58ORF35380P (36% identity) | Cmi6605ORF1445P | |
| 1446 | 99 aa hypothetical protein | |||
| 4195 | uncharacterized conserved small protein | |||
| 4196 | S | S.Bpe12804ORF3991P (38% identity) | S.Cmi6605ORF4197P | |
| 4197 | M | M.Ssp7339ORF17225P (78% identity) | M.Cmi6605ORF4197P | |
| 4198 | 364 aa hypothetical protein | |||
| 4199 | transposase family protein | |||
| 4200 | leucine-rich repeat (LRR) protein | |||
| 4201 | 84 aa hypothetical protein | |||
| 4202 | R | PprDORF353P (76% identity) | Cmi6605ORF4197P | |
| 4203 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 701 | Reverse transcriptase (RNA-dependent DNA | |||
| 702 | M | M.Aci21ORF55610P (53% identity) | RCCGGY | M.Cmi6605ORF702P |
| 703 | transcriptional regulator | |||
| 781 | serine/threonine protein phosphatase | |||
| 782 | R | Ali4191ORF788P (59% identity) | RGCGCY | Cmi6605ORF783P |
| 783 | M | M.SmoDY10ORF10460P (77% identity) | RGCGCY | M.Cmi6605ORF783P |
| 784 | DNA sulfur modification protein DndD | |||
| 1122 | phosphoglycerate mutase 1 | |||
| 1123 | M | M.BspJ72I (73% identity) | CTGCAG | M.Cmi6605ORF1123P |
| 1124 | R | BspJ72IP (82% identity) | CTGCAG | Cmi6605ORF1123P |
| 1125 | glyceraldehyde-3-phosphate dehydrogenase, type | |||
| 1259 | 110 aa hypothetical protein | |||
| 1260 | RM | Cst3363ORF8710P (37% identity) | Cmi6605ORF1260P | |
| 1261 | phage-associated protein | |||
| 1350 | 33 aa hypothetical protein | |||
| 1351 | RM | Csp7716ORF58750P (48% identity) | Cmi6605ORF1350P | |
| 1353 | 132 aa hypothetical protein | |||
| 1514 | 57 aa hypothetical protein | |||
| 1515 | M | M.Cbr22ORF38860P (72% identity) | GCATGC | M.Cmi6605ORF1515P |
| 1516 | transposase family protein | |||
| 1767 | 236 aa hypothetical protein | |||
| 1768 | RM | Psp7367ORF3723P (60% identity) | Cmi6605ORF1768P | |
| 1769 | DNA/RNA helicase, superfamily II, SNF2 family | |||
| 2522 | chemotaxis protein histidine kinase-like | |||
| 2523 | RM | Ael3563ORF10920P (56% identity) | Cmi6605ORF2523P | |
| 2524 | transcriptional regulator | |||
| 3187 | 110 aa hypothetical protein | |||
| 3188 | M | M.MspREN29ORFCP (66% identity) | CGATCG | M.Cmi6605ORF3188P |
| 3189 | R | CmeDORF291820P (66% identity) | CGATCG | Cmi6605ORF3188P |
| 3190 | lipid A disaccharide synthetase | |||
| plasmid pCHA6605.01 | ||||
| 5995 | DNA/RNA helicase, superfamily II, SNF2 family | |||
| 5996 | RM | NspHK01ORF7780P (59% identity) | Cmi6605ORF5996P | |
| 5997 | low-complexity protein | |||
| 6293 | transcription factor, MBF1 like | |||
| 6294 | RM | NpuORF2338P (62% identity) | Cmi6605ORF6294P | |
| 6296 | transposase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4257 | 226 aa hypothetical protein | |||
| 4258 | R | Csp7425MrrP (81% identity) | Cmi6605MrrP | |
| 4259 | DNA gyrase, A subunit | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3815 | 147 aa hypothetical protein | |||
| 3816 | M | M.Gsp7407ORF1095P (62% identity) | GATC | M.Cmi6605ORF3816P |
| 3817 | 182 aa hypothetical protein | |||