Lactobacillus helveticus DPC 4571 |
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Putative Lactobacillus helveticus DPC 4571 RM systems
Ref: Callanan,M. et al. (er) J. Bacteriol. (2007) In press
REBASE ref # 10398
Complete sequence: 2,080,931 bp
GenBank #: CP000517 (NC_010080)
REBASE acronym: LheD
Org_num: 4946
All begin lhv_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1153 | 280 aa hypothetical protein | |||
| 1154 | M | M.LheLH99ORF1156P (98% identity) | M.LheDORF1154P | |
| 1155 | S | S2.LheMB21ORF5825P (59% identity) | S1.LheDORF1154P | |
| 1156 | Phage integrase | |||
| 1157 | S | S1.LheD75ORF5280P (56% identity) | S2.LheDORF1154P | |
| 1158 | R | LheD75ORF5280P (99% identity) | LheDORF1154P | |
| 1161 | 421 aa hypothetical protein | |||
| 1476 | 204 aa hypothetical protein | |||
| ??? | S | S.LjoBS15ORF2130P (52% identity) | S.LheDORF1480P | |
| 1480 | M | M.Lhe8701ORF4620P (99% identity) | M.LheDORF1480P | |
| 1481 | R | Lhe8105ORF3945P (100% identity) | LheDORF1480P | |
| 1482 | 483 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | transposase | |||
| 31 | R | LheLH99ORF40P (100% identity) | LheDORF31P | |
| 32 | pseudogene | |||
| 259 | 402 aa hypothetical protein | |||
| 260 | RM | LjoDC222ORF1380P (85% identity) | LheDORF260P | |
| 263 | transposase | |||
| 1031 | Restriction endonuclease | |||
| ??? | M | M.Lhe8105ORF6145P (99% identity) | M.LheDORF1032P | |
| 1035 | 171 aa hypothetical protein | |||
| 1212 | pseudogene | |||
| 1214 | M | M.LheLh12ORF4930P (100% identity) | GATC | M.LheDORF1214P |
| 1215 | 212 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26 | membrane protein | |||
| 27 | M | M.Lre03ORFGP (66% identity) | M.LheDORF27P | |
| 28 | R | LspC25ORF11015P (64% identity) | LheDORF27P | |
| 29 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 68 | APC family amino acid-polyamine-organocation transporter | |||
| 69 | R | Lhe8105ORF340P (100% identity) | LheDORF69P | |
| 70 | Penicillin binding protein | |||
| 1030 | transposase | |||
| 1031 | R | Lhe8105MrrP (100% identity) | LheDMrrP | |
| ??? | DNA methyltransferase | |||
| 2509 | 123 aa hypothetical protein | |||
| 1152 | R | LheMB21Mrr2P (99% identity) | LheDMrr2P | |
| 1153 | 280 aa hypothetical protein | |||
| 1977 | Carbonate dehydratase | |||
| 1978 | R | LheD75MrrP (100% identity) | LheDMrr3P | |
| 1979 | Methyltransferase | |||