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Putative Rivularia species PCC 7116 RM systems
Ref: Gugger,M. et al. unpublished
REBASE ref # 15335
Complete sequence: 8,698,463 bp
GenBank #: CP003549
REBASE acronym: Rsp7116
Org_num: 9774
All begin Riv7116_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2439 | CRISPR-associated protein Cas5/DevS, subtype | |||
2440 | R | Nsp0702ORF22965P (77% identity) | Rsp7116ORF2444P | |
2441 | 137 aa hypothetical protein | |||
2442 | 403 aa hypothetical protein | |||
2443 | S | S.Afl81ORFG1P (60% identity) | S.Rsp7116ORF2444P | |
2444 | M | M.SspHK05ORF64450P (37% identity) | M.Rsp7116ORF2444P | |
2445 | 80 aa hypothetical protein | |||
5032 | 148 aa hypothetical protein | |||
5033 | M | M.Nsp5183ORF350P (82% identity) | M.Rsp7116ORF5033P | |
5034 | S | S.Mch9957III (32% identity) | S.Rsp7116ORF5033P | |
5035 | R | Nsp0702ORF4940P (83% identity) | Rsp7116ORF5033P | |
5036 | metal-dependent hydrolase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
666 | 149 aa hypothetical protein | |||
667 | R | Fma592ORF16950P (85% identity) | TTCGAA | Rsp7116ORF668P |
668 | M | M.Fsp3754ORF14790P (67% identity) | TTCGAA | M.Rsp7116ORF668P |
669 | glycine/D-amino acid oxidase, deaminating | |||
873 | pseudogene | |||
??? | M | DNA adenine methylase Dam | GCATGC | M.Rsp7116ORFABP |
877 | transposase | |||
??? | M | M.Cmi6605ORF1515P (52% identity) | GCATGC | M.Rsp7116ORFAAP |
878 | acetyltransferase, ribosomal protein | |||
1818 | Type III restriction enzyme, res subunit | |||
1819 | M | site-specific DNA methylase | M.Rsp7116ORF1819P | |
1820 | 545 aa hypothetical protein | |||
2230 | transposase | |||
2231 | RM | Nsp7107ORF4712P (58% identity) | Rsp7116ORF2231P | |
2232 | DNA/RNA helicase, superfamily II, SNF2 family | |||
2294 | 78 aa hypothetical protein | |||
2295 | R | BsuBI/PstI restriction endonuclease C-terminus | CTGCAG | Rsp7116ORF2296P |
2296 | M | M.Csp7507ORF613P (74% identity) | CTGCAG | M.Rsp7116ORF2296P |
2297 | UDP-N-acetylglucosamine--N-acetylmuramyl- | |||
3093 | transcriptional regulator with | |||
3094 | R | PasMWHORF300P (36% identity) | GCCGGC | Rsp7116ORF3095P |
3095 | M | DNA-methyltransferase Dcm | GCCGGC | M.Rsp7116ORF3095P |
3096 | 330 aa hypothetical protein | |||
4671 | PAS domain S-box | |||
4672 | M | M.Cpa267ORF12270P (84% identity) | GATC | M.Rsp7116ORF4672P |
4673 | Protein of unknown function (DUF751) | |||
4990 | transcriptional regulator | |||
4991 | M | M.Asp90ORF13003P (86% identity) | M.Rsp7116ORF4991P | |
4992 | ATPase | |||
4993 | S | S.Asp90ORF13003P (48% identity) | S.Rsp7116ORF4991P | |
4994 | serine/threonine protein kinase | |||
5614 | 53 aa hypothetical protein | |||
5615 | M | M.Cpa267ORF70960P (83% identity) | CGATCG | M.Rsp7116ORF5615P |
5616 | 174 aa hypothetical protein | |||
5800 | NurA domain-containing protein | |||
5801 | M | M.Nsp7524ORF3680P (74% identity) | CAGCTG | M.Rsp7116ORF5801P |
5802 | lysophospholipase L1-like esterase | |||
5831 | adenosylmethionine--8-amino-7-oxononanoate transaminase | |||
5832 | R | SspHK05ORF54910P (65% identity) | GGCC | Rsp7116ORF5833P |
5833 | M | M.Cpa267ORF3560P (88% identity) | GGCC | M.Rsp7116ORF5833P |
5834 | phenazine biosynthesis protein PhzF family | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1816 | 120 aa hypothetical protein | |||
1817 | M | M.Cpa267ORF56000P (85% identity) | M.Rsp7116ORF1817P | |
1818 | R | Cpa267ORF40010P (94% identity) | Rsp7116ORF1817P | |
1819 | site-specific DNA methylase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
6490 | transcription regulator containing HTH | |||
6491 | R | 393 aa hypothetical protein | Rsp7116McrBP | |
6492 | 622 aa hypothetical protein |