Ref: Gugger,M. et al. unpublished

REBASE ref # 15335

Complete sequence: 8,698,463 bp

GenBank #: CP003549

REBASE acronym: Rsp7116

Org_num: 9774

 

All begin Riv7116_

Type I
ORF Gene Most similar Specificity Name
 
2439 CRISPR-associated protein Cas5/DevS, subtype
2440 R Afl81ORFG1P (0% identity) Rsp7116ORF2444P
2441 137 aa hypothetical protein
2442 403 aa hypothetical protein
2443 S S.Afl81ORFG1P (0% identity) S.Rsp7116ORF2444P
2444 M M.SspHK05ORF64450P (0% identity) M.Rsp7116ORF2444P
2445 80 aa hypothetical protein
 
5032 148 aa hypothetical protein
5033 M M.Nsp5183ORF350P (0% identity) M.Rsp7116ORF5033P
5034 S S.Mch9957III (0% identity) S.Rsp7116ORF5033P
5035 R Nsp5183ORF350P (0% identity) Rsp7116ORF5033P
5036 metal-dependent hydrolase
Type II
ORF Gene Most similar Specificity Name
 
666 149 aa hypothetical protein
667 R Fma592ORF16950P (0% identity) TTCGAA Rsp7116ORF668P
668 M M.Fsp3754ORF14790P (0% identity) TTCGAA M.Rsp7116ORF668P
669 glycine/D-amino acid oxidase, deaminating
 
873 pseudogene
??? M M.Cmi6605ORF1515P (0% identity) GCATGC M.Rsp7116ORFABP
877 transposase
??? M M.Cmi6605ORF1515P (0% identity) GCATGC M.Rsp7116ORFAAP
878 acetyltransferase, ribosomal protein
 
1818 Type III restriction enzyme, res subunit
1819 M M.Csp4101ORF25890P (0% identity) M.Rsp7116ORF1819P
1820 545 aa hypothetical protein
 
2230 transposase
2231 RM Nsp7107ORF4712P (0% identity) Rsp7116ORF2231P
2232 DNA/RNA helicase, superfamily II, SNF2 family
 
2294 78 aa hypothetical protein
2295 R TerORF4525P (0% identity) CTGCAG Rsp7116ORF2296P
2296 M M.Csp7507ORF613P (0% identity) CTGCAG M.Rsp7116ORF2296P
2297 UDP-N-acetylglucosamine--N-acetylmuramyl-
 
3093 transcriptional regulator with
3094 R PasMWHORF300P (0% identity) GCCGGC Rsp7116ORF3095P
3095 M M.HmoORF2858P (0% identity) GCCGGC M.Rsp7116ORF3095P
3096 330 aa hypothetical protein
 
4671 PAS domain S-box
4672 M M.Cpa267ORF12270P (0% identity) GATC M.Rsp7116ORF4672P
4673 Protein of unknown function (DUF751)
 
4990 transcriptional regulator
4991 M M.Asp90ORF13003P (0% identity) M.Rsp7116ORF4991P
4992 ATPase
4993 S restriction endonuclease S subunit S.Rsp7116ORF4991P
4994 serine/threonine protein kinase
 
5614 53 aa hypothetical protein
5615 M M.Cpa267ORF70960P (0% identity) CGATCG M.Rsp7116ORF5615P
5616 174 aa hypothetical protein
 
5800 NurA domain-containing protein
5801 M M.Nsp7524ORF3680P (0% identity) CAGCTG M.Rsp7116ORF5801P
5802 lysophospholipase L1-like esterase
 
5831 pseudogene
5832 R SspHK05ORF54910P (0% identity) GGCC Rsp7116ORF5833P
5833 M M.Cpa267ORF3560P (0% identity) GGCC M.Rsp7116ORF5833P
5834 phenazine biosynthesis protein PhzF family
Type III
ORF Gene Most similar Specificity Name
 
1816 120 aa hypothetical protein
1817 M M.Cpa267ORF56000P (0% identity) M.Rsp7116ORF1817P
1818 R Cpa267ORF40010P (0% identity) Rsp7116ORF1817P
1819 site-specific DNA methylase
Type IV
ORF Gene Most similar Specificity Name
 
6490 transcription regulator containing HTH
6491 R AquMcrBP (0% identity) Rsp7116McrBP
6492 622 aa hypothetical protein