Paenibacillus alvei DSM 29 |
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Putative Paenibacillus alvei DSM 29 RM systems
Ref: Djukic,M. et al. J. Bacteriol. 194 (22), 6365 (2012)
REBASE ref # 15149
Contig set: 6,834,602 bp
GenBank #: AMBZ00000000 (NZ_AMBZ00000000)
REBASE acronym: Pal29
Org_num: 9659
All begin PAV_109p, PAV_11c, PAV_13c, PAV_14c, PAV_16c, PAV_1c, PAV_2c, PAV_3c
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | methyltransferase | |||
| 10 | M | M.Pal29ORF1000P (96% identity) | M.Pal29ORF10P | |
| 20 | phosphoadenosine phosphosulfate reductase | |||
| ??? | M | M.Pal29ORF990P (100% identity) | M.Pal29ORFAP | |
| 10 | cytosine-specific methyltransferase | |||
| 390 | 354 aa hypothetical protein | |||
| 400 | M | M.Pji16679ORFCP (65% identity) | M.Pal29ORF400P | |
| 410 | 204 aa hypothetical protein | |||
| 460 | 184 aa hypothetical protein | |||
| 470 | M | M.PalBLR1ORF13064P (53% identity) | M.Pal29ORF470P | |
| 480 | 67 aa hypothetical protein | |||
| 400 | 109 aa hypothetical protein | |||
| ??? | M | M.Bla1821LORF22005P (50% identity) | GCWGC | M.Pal29ORF410P |
| 430 | 81 aa hypothetical protein | |||
| 550 | 78 aa hypothetical protein | |||
| 560 | M | M.AmiNORF3845P (52% identity) | M.Pal29ORF560P | |
| 570 | 352 aa hypothetical protein | |||
| 980 | 67 aa hypothetical protein | |||
| 990 | M | M.Pal29ORFAP (100% identity) | M.Pal29ORF990P | |
| 1000 | cytosine-specific methyltransferase | |||
| 990 | methyltransferase | |||
| 1000 | M | M.Pal29ORF10P (96% identity) | M.Pal29ORF1000P | |
| 1010 | 125 aa hypothetical protein | |||
| 1560 | 200 aa hypothetical protein | |||
| 1570 | M | M.PthaleORF27235P (76% identity) | M.Pal29ORF1570P | |
| 1580 | 90 aa hypothetical protein | |||
| 3480 | multidrug resistance protein 2 | |||
| 3490 | M | M.PmeBin383ORFCP (56% identity) | GGCC | M.Pal29ORF3490P |
| 3500 | R | R1.Pod15391IP (79% identity) | GGCC | Pal29ORF3490P |
| 3510 | V | V.EspJLM2ORFAP (50% identity) | V.Pal29ORF3490P | |
| 3520 | 86 aa hypothetical protein | |||
| 4650 | 246 aa hypothetical protein | |||
| 4660 | M | M.PalTS15ORF17611P (91% identity) | GGWCC | M.Pal29ORF4660P |
| 4670 | oxidoreductase YhdF | |||
| 5510 | superoxide dismutase | |||
| 5520 | M | M.PspKS1ORF9750P (92% identity) | GATC | M.Pal29ORF5520P |
| 5530 | 47 aa hypothetical protein | |||
| 10390 | 228 aa hypothetical protein | |||
| 10400 | M | M.Ppe390ORF13985P (64% identity) | M.Pal29ORF10400P | |
| 10410 | replicative DNA helicase DnaC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 580 | 138 aa hypothetical protein | |||
| 590 | R | PlaEMrrP (83% identity) | Pal29MrrP | |
| 600 | DNA-binding protein | |||