Lactococcus raffinolactis 4877 |
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Putative Lactococcus raffinolactis 4877 RM systems
Ref: Meslier,V. et al. unpublished
REBASE ref # 15148
Contig set: 2,280,761 bp
GenBank #: CALL00000000 (NZ_CALL00000000)
REBASE acronym: Lra4877
Org_num: 9669
All begin BN193_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4835 | M | M.Lla866ORF635P (99% identity) | M.Lra4877ORF4835P | |
| 4840 | R | LcrJM2ORF4610P (99% identity) | Lra4877ORF4835P | |
| 4845 | S | S2.Sma27MVORF4030P (91% identity) | S.Lra4877ORF4835P | |
| 4850 | 39 aa hypothetical protein | |||
| 11480 | 277 aa hypothetical protein | |||
| 11485 | S | S.LlaSD96ORF60002P (63% identity) | S.Lra4877ORF11485P | |
| 11490 | OrfX | |||
| 9415 | Resolvase | |||
| ??? | S | S.Lla63III (63% identity) | S.Lra4877ORF9420P | |
| 9430 | OrfX | |||
| 5820 | sensor histidine kinase | |||
| 5825 | S | S.Lba1988III (62% identity) | S.Lra4877ORF5825P | |
| 5830 | 123 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.LapRsy01ORF286P (56% identity) | M.Lra4877ORFBP | |
| ??? | M | type III restriction-modification system methylation subunit | M.Lra4877ORFAP | |
| 5690 | 106 aa hypothetical protein | |||
| 2465 | conjugative transposon protein | |||
| ??? | M | M.Lra12SORF5690P (96% identity) | M.Lra4877ORF2470P | |
| 2480 | 133 aa hypothetical protein | |||
| 9175 | 88 aa hypothetical protein | |||
| 9180 | M | M.Lpi47ORF1959P (87% identity) | M.Lra4877ORF9180P | |
| 9185 | 40 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11025 | M | M.Bsp353ORFBP (47% identity) | M.Lra4877ORF11025P | |
| 11030 | phage protein | |||
| 11035 | R | Bsp353ORFBP (81% identity) | Lra4877ORF11025P | |
| 11040 | 189 aa hypothetical protein | |||
| 8655 | Methyl-accepting chemotaxis protein | |||
| 8660 | M | M1.LlaO184II (100% identity) | M1.Lra4877ORF8660P | |
| 8665 | 86 aa hypothetical protein | |||
| 8670 | M | M2.LlaO184IIP (51% identity) | M2.Lra4877ORF8660P | |
| 8675 | R | LlaO184IIP (99% identity) | Lra4877ORF8660P | |
| 8680 | 212 aa hypothetical protein | |||
| 2505 | 423 aa hypothetical protein | |||
| ??? | R | EgiCR1ORF4125P (99% identity) | Lra4877ORF2520P | |
| 2520 | M | M.LkeZW3ORF1121P (59% identity) | M.Lra4877ORF2520P | |
| 2525 | 694 aa Hypothetical protein | |||
| 5760 | LSU ribosomal protein L33p | |||
| 5765 | M | M.Sma5683ORF5375P (99% identity) | M.Lra4877ORF5765P | |
| 5770 | R | Lcr007ORF4758P (99% identity) | Lra4877ORF5765P | |
| 5775 | 255 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10580 | Resolvase | |||
| 10585 | R | Spa503McrCP (86% identity) | Lra4877McrCP | |
| 10590 | R | Spa503McrBP (50% identity) | Lra4877McrBP | |
| 10595 | ATPase associated with various cellular | |||