Propionibacterium acidipropionici ATCC 4875 |
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Putative Propionibacterium acidipropionici ATCC 4875 RM systems
Ref: Parizzi,L.P. et al. BMC Genomics 13 (1), 562 (2012)
REBASE ref # 15218
Complete sequence: 3,656,170 bp
GenBank #: CP003493
REBASE acronym: Pac4875
Org_num: 9612
All begin PACID_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7520 | 925 aa hypothetical protein | |||
| 7530 | R | Pac2230IIIP (99% identity) | Pac4875ORF7550P | |
| ??? | S | S.Pac2230III (100% identity) | S.Pac4875ORF7550P | |
| 7550 | M | M.Aac1105ORF13920P (100% identity) | M.Pac4875ORF7550P | |
| 7560 | 652 aa hypothetical protein | |||
| 10540 | GTP-binding protein YchF | |||
| 10550 | M | M.Pac2230II (100% identity) | M.Pac4875ORF10550P | |
| ??? | S | S.Pac2230II (100% identity) | S.Pac4875ORF10550P | |
| 10570 | R | Pac2230IIP (100% identity) | Pac4875ORF10550P | |
| 10580 | 349 aa hypothetical protein | |||
| 17370 | metal-dependent hydrolase / zinc | |||
| 17380 | R | Pac2230ORF12850P (100% identity) | Pac4875ORF17420P | |
| 17390 | Transposase | |||
| 17400 | Transposase, Mutator family protein | |||
| 17410 | S | type I restriction enzyme | S.Pac4875ORF17420P | |
| 17420 | M | M.Pac2230ORF12850P (100% identity) | M.Pac4875ORF17420P | |
| 17440 | NTP pyrophosphohydrolase including oxidative | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 930 | Phosphoenolpyruvate-dependent sugar | |||
| 940 | V | V.Msp317ORF4405P (47% identity) | V.Pac4875ORF950P | |
| 950 | M | M.Nsp117ORF16815P (67% identity) | GCCGGC | M.Pac4875ORF950P |
| ??? | R | RhoWYORF4310P (41% identity) | GCCGGC | Pac4875ORF950P |
| 960 | Carbohydrate kinase, FGGY family protein | |||
| 3250 | helicase domain-containing protein | |||
| 3260 | RM | AjeJS280ORF12645P (81% identity) | Pac4875ORF3260P | |
| 3810 | Tagaturonate reductase | |||
| 3820 | RM | Aac1105ORF11770P (57% identity) | Pac4875ORF3780P | |
| 3830 | transposase IS4 family protein | |||
| 18800 | 101 aa hypothetical protein | |||
| 18810 | RM | Aje13652ORF531P (83% identity) | Pac4875ORF18810P | |
| 18820 | NT_2-5OAS_ClassI-CCAase domain-containing | |||
| 22980 | 236 aa hypothetical protein | |||
| 22990 | R | Csp2102ORFCP (55% identity) | CTGCAG | Pac4875ORF23000P |
| 23000 | M | M.RqiPM1ORF13735P (36% identity) | CTGCAG | M.Pac4875ORF23000P |
| 23020 | Hydrolase, alpha/beta domain-containing protein | |||