Nitrososphaera gargensis Ga9.2 |
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Putative Nitrososphaera gargensis Ga9.2 RM systems
Ref: Spang,A. et al. Environ. Microbiol. (2012) In press
REBASE ref # 15083
Complete sequence: 2,833,868 bp
GenBank #: CP002408
REBASE acronym: Nga92
Org_num: 9580
All begin Ngar_c
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 29120 | 386 aa hypothetical protein | |||
| 29130 | M | M.Mth55ORF2253P (73% identity) | M.Nga92ORF29130P | |
| 29140 | S | S.MflE032ORF11195P (38% identity) | S.Nga92ORF29130P | |
| 29150 | R | KstCSTR1ORF8570P (55% identity) | Nga92ORF29130P | |
| 29160 | 93 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12440 | 287 aa hypothetical protein | |||
| ??? | M | cytosine-specific methyltransferase | M.Nga92ORF12450P | |
| 12460 | 385 aa hypothetical protein | |||
| 13920 | 88 aa hypothetical protein | |||
| 13930 | M | M.NevSR1ORF2372P (41% identity) | GATC | M.Nga92ORF13930P |
| 13940 | 134 aa hypothetical protein | |||
| 14130 | signal transduction response regulator, | |||
| 14140 | M | M.KmeB1ORF410P (55% identity) | CGCG | M.Nga92ORF14140P |
| 14150 | 110 aa hypothetical protein | |||
| 16220 | 3-dehydroquinate synthase | |||
| 16230 | M | M.Ucr1ORFAP (74% identity) | AGCT | M.Nga92ORF16230P |
| 16240 | 54 aa hypothetical protein | |||
| 22670 | formyltetrahydrofolate deformylase | |||
| 22680 | RM | UbaMDORFL11P (18% identity) | Nga92ORF22680P | |
| 22690 | transposase | |||
| 24750 | 55 aa hypothetical protein | |||
| 24760 | M | M.NviPLX03ORF7700P (71% identity) | M.Nga92ORF24760P | |
| 24770 | cob(II)yrinic acid a,c-diamide | |||
| 27830 | 62 aa hypothetical protein | |||
| 27840 | R | type II restriction enzyme | CCWGG | Nga92ORF27850P |
| 27850 | M | M.Aba96081ORF4295P (36% identity) | CCWGG | M.Nga92ORF27850P |
| 27860 | 146 aa hypothetical protein | |||
| 31800 | 79 aa hypothetical protein | |||
| 31810 | M | M.NevSR1ORF3263P (69% identity) | GTAC | M.Nga92ORF31810P |
| 31820 | precorrin-6Y C5,15-methyltransferase | |||
| 34990 | acetate--CoA ligase | |||
| ??? | M | M.RpaBORF4152P (34% identity) | TCTAGA | M.Nga92ORF35000P |
| 35040 | transposase | |||
| 35700 | adenylyl-sulfate kinase | |||
| 35710 | M | M.NevSR1ORF39P (69% identity) | M.Nga92ORF35710P | |
| 35720 | undecaprenyl-diphosphatase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30420 | translation initiation factor 2, subunit beta | |||
| 30430 | M | methylase N-4/N-6 domain protein | M.Nga92ORF30430P | |
| 30440 | 101 aa hypothetical protein | |||