Novosphingobium species AP12 |
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Putative Novosphingobium species AP12 RM systems
Ref: Brown,S.D. et al. J. Bacteriol. 194 (21), 5991-5993 (2012)
REBASE ref # 15055
Contig set: 5,611,617 bp
GenBank #: AKKE00000000 (NZ_AKKE00000000)
REBASE acronym: Nsp12
Org_num: 9539
All begin PMI02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4377 | site-specific recombinase XerD | |||
| 4378 | R | SyaF8ORF15705P (95% identity) | Nsp12ORF4379P | |
| 4379 | M | M.SyaF8ORF15705P (95% identity) | M.Nsp12ORF4379P | |
| 4380 | S | S.RpaBORF3652P (43% identity) | S.Nsp12ORF4379P | |
| 4381 | 161 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1437 | 51 aa hypothetical protein | |||
| 1438 | M | M.NspP6WORF10310P (94% identity) | GANTC | M.Nsp12ORF1438P |
| 1439 | dihydropteroate synthase | |||
| 4862 | 293 aa hypothetical protein | |||
| 4863 | M | M.SspSRS2ORF17725P (57% identity) | M.Nsp12ORF4863P | |
| 4864 | 88 aa hypothetical protein | |||
| 4660 | site-specific recombinase XerD | |||
| 4661 | M | M.SspVSS2ORF1555P (66% identity) | M.Nsp12ORF4661P | |
| ??? | V | V.CseUORF449P (57% identity) | V.Nsp12ORF4661P | |
| 4662 | 275 aa hypothetical protein | |||
| 4916 | 402 aa hypothetical protein | |||
| 4917 | M | M.SheMHORFFP (68% identity) | M.Nsp12ORF4917P | |
| 4918 | Protein of unknown function (DUF1488) | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4380 | restriction endonuclease S subunit | |||
| ??? | R | SyaF8MrrP (90% identity) | Nsp12MrrP | |
| 4383 | 276 aa hypothetical protein | |||