Helicobacter pylori FD430 |
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Putative Helicobacter pylori FD430 RM systems
Ref: Gunaletchumy,S.P. et al. J. Bacteriol. 194 (20), 5695-5696 (2012)
REBASE ref # 15007
GenBank #: AKHN00000000
REBASE acronym: HpyFD430
Org_num: 9458
All begin N403_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | type I restriction enzyme | S.HpyFD430ORFCP | |
| ??? | M | M.HpyKH11ORFA1P (96% identity) | M.HpyFD430ORFCP | |
| ??? | ngoPIIM gene product | |||
| ??? | S | S.HpyUSU101ORF4170P (61% identity) | S.HpyFD430ORFZP | |
| ??? | S | S.Hpyfe81ORF3225P (44% identity) | S.HpyFD430ORFYP | |
| 4100 | type I restriction endonuclease | |||
| ??? | R | HpyMA04ORF4005P (95% identity) | HpyFD430ORFRP | |
| ??? | hypothetical protein | |||
| 4100 | M | M.HpyKH11ORFA1P (96% identity) | M.HpyFD430ORFCP | |
| 4105 | DNA methyltransferase | |||
| ??? | M | M.HpyNAB47ORFLP (47% identity) | M.HpyFD430ORFQP | |
| ??? | S | S.HpyMKF8ORF1454P (52% identity) | S.HpyFD430ORFQP | |
| ??? | S | S.Hpyfe81ORF3225P (44% identity) | S.HpyFD430ORFYP | |
| ??? | S | S.HpyTW18ORF2360P (97% identity) | S.HpyFD430ORFK1P | |
| ??? | M | M.HpyBG8ORF2120P (95% identity) | M.HpyFD430ORFK1P | |
| ??? | R | HpyNP08ORF1970P (74% identity) | HpyFD430ORFK1P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyKH39ORFXP (40% identity) | GATATC | M.HpyFD430ORFJP |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | M | M.HpyMA02ORF2395P (81% identity) | GGCC | M.HpyFD430ORFLP |
| ??? | R | HpyOK304ORFWP (98% identity) | GGCC | HpyFD430ORFLP |
| ??? | RM | 278 aa hypothetical protein | HpyFD430ORFBP | |
| ??? | R | HpyMA04IVP (93% identity) | GAAGA | HpyFD430ORFHP |
| ??? | M | M2.HpyKH39ORFYP (98% identity) | GAAGA | M1.HpyFD430ORFHP |
| ??? | M | type IIS restriction enzyme M2 protein | GAAGA | M2.HpyFD430ORFHP |
| ??? | hypothetical protein | |||
| ??? | R | HpyKH30ORFZP (93% identity) | ACGT | HpyFD430ORFAP |
| ??? | M | cytosine-specific methyltransferase | ACGT | M.HpyFD430ORFAP |
| ??? | type I restriction enzyme M protein | |||
| ??? | M | ngoPIIM gene product | GGCC | M.HpyFD430ORFDP |
| ??? | type III R-M system methyltransferase | |||
| ??? | R | HpyMM03VP (93% identity) | CCGG | HpyFD430ORFD1P |
| ??? | M | M.HpyMA25III (99% identity) | CCGG | M.HpyFD430ORFD1P |
| ??? | M | M.HpyFD423ORFWP (98% identity) | TCGA | M.HpyFD430ORFC1P |
| ??? | Endonuclease MjaVIP | |||
| ??? | M | M.HpyKH43ORFDP (99% identity) | GGNNCC | M.HpyFD430ORFEP |
| ??? | R | HpyMA25ORF3330P (100% identity) | GGNNCC | HpyFD430ORFEP |
| ??? | M | M.HpyMA19IV (97% identity) | ATTAAT | M.HpyFD430ORFGP |
| ??? | type II adenine specific methyltransferase | |||
| 4100 | type I restriction endonuclease | |||
| ??? | M | M.HpyMA02ORF2395P (81% identity) | GGCC | M.HpyFD430ORFLP |
| ??? | R | HpyOK304ORFWP (98% identity) | GGCC | HpyFD430ORFLP |
| 4115 | membrane protein | |||
| ??? | R | HpyH027VIP (98% identity) | GANTC | HpyFD430ORFFP |
| ??? | M | M.HpyNP04VIII (98% identity) | GANTC | M.HpyFD430ORFFP |
| ??? | M | M.HpyMA19VII (99% identity) | TCNNGA | M.HpyFD430ORFVP |
| ??? | R | HpyFD423ORFG1P (99% identity) | TCNNGA | HpyFD430ORFVP |
| ??? | M | M.HpyMM01ORF2215P (96% identity) | ACGT | M.HpyFD430ORFNP |
| ??? | M | M.HpyNAB47ORFSP (98% identity) | GCGC | M.HpyFD430ORFWP |
| ??? | R | HpyFD423ORFTP (71% identity) | GTAC | HpyFD430ORFE1P |
| ??? | M | M.HpyNAB47ORFE1P (99% identity) | M.HpyFD430ORFXP | |
| ??? | M | M2.HpyUM084ORF2915P (100% identity) | CCTC | M2.HpyFD430ORFTP |
| ??? | M | M1.HpyMA25V (98% identity) | CCTC | M1.HpyFD430ORFTP |
| ??? | RM | HpyMA16ORF6730P (65% identity) | HpyFD430ORFUP | |
| ??? | R | HpyMA17XIIP (99% identity) | GTNNAC | HpyFD430ORFB1P |
| ??? | M | M.HpyUM114ORF7675P (92% identity) | GTNNAC | M.HpyFD430ORFB1P |
| ??? | R | HpyFD719ORF765P (97% identity) | GATC | HpyFD430ORFA1P |
| ??? | M | M.HpyUM067ORF1130P (97% identity) | GATC | M.HpyFD430ORFA1P |
| ??? | RM | HpyNP12ORF3470P (91% identity) | HpyFD430ORFJ1P | |
| ??? | M | M.HpyKH39ORFBP (97% identity) | CATG | M.HpyFD430ORFF1P |
| ??? | RM | HpyKH4ORFXP (94% identity) | HpyFD430ORFG1P | |
| ??? | type III restriction enzyme | |||
| ??? | R | HpyUM084ORF1020P (100% identity) | CTNAG | HpyFD430ORFL1P |
| ??? | M | M.HpySG13VI (99% identity) | CTNAG | M.HpyFD430ORFL1P |
| ??? | S | S.HpyIR1ORF6985P (62% identity) | S.HpyFD430ORFM1P | |
| ??? | RM | HpyMA02ORF7210P (98% identity) | HpyFD430ORFM1P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | R | HpyKH17ORFWP (92% identity) | HpyFD430ORFKP | |
| ??? | M | M.HpyUM084ORF2180P (68% identity) | M.HpyFD430ORFMP | |
| ??? | R | HpyKH15ORFA1P (95% identity) | HpyFD430ORFSP | |
| ??? | M | M.HpyMA19XII (95% identity) | M.HpyFD430ORFSP | |
| ??? | type IIS restriction enzyme M2 protein | |||
| ??? | M | M.HpyKH31ORFUP (55% identity) | M.HpyFD430ORFIP | |
| ??? | R | HpyMA17ORF3740P (96% identity) | HpyFD430ORFI1P | |
| ??? | M | M.HpyKH22ORFBP (95% identity) | M.HpyFD430ORFI1P | |
| ??? | type II S restriction-modification protein | |||
| ??? | R | HpyMA17ORF6785P (97% identity) | HpyFD430ORFH1P | |
| ??? | M | M.HpyUM084ORF2180P (28% identity) | M.HpyFD430ORFH1P | |